Ss1.1-Mixg-0003d06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGGCTGGCGGCGAAGCGCGCGGCGCGAGCGGAGGCCCGGGAGATCAGGATGAAGGAGC TGGAGCGGCAGCAGAAGGAGGTTGAAGAGAGATCAGAAAAGGACTTTGAGAAGGGCTCCC GTAGCCTGCCCAGCCTGTCGGCAGCCACCCTAGCCTCCCTTGGGGGCACCTCCTCTCGCA GAGGCAGCGGGGACACCTCCATCTCCCTTGACACCGAGGCGTCCATCAGGGAAATCAAGG ACTCCCTGGCGGAAGCGGAGGAGAAATACAAGAAGGCCATGGTCTCCAACGCGCAGCTGG ACAACGAGAAGACCAACTTCATGTACCAGGTGGACACGCTGAAGGACGTGCTGCTGGAGC TGGAGGAGCAGCTGGCCGAGTCCCGGCGGCAGCTCGAGGAGAAGAGCAAGGAGTTTGAAA GGGAGAAGCACGCCCACAGCATCCTACAGTTTCAGTTTGCTGAAGTCAAAGAGGCCCTGA AGCAAAGGGAAGAGCTGCTTGAGAAACACGGGATAATACTCAATTCAGAAACAGCCACCA ATGGCGAGACCTCAGACCCTCTCAGCCGTGTGGAACACCCAGGGTCTACGAAGATGACGA AGGAGGAGGTCGGCGCTCCCCAGGCCCCCGGGGACGGGACGCTAGGAAGAGCCAGTGAAG TGGAGGTGGCAAATGAGATGGTGGAGCGTGTGGGGAAAAGCGAGATCTTGCCGGATTCTG AGCAAGAACAGCACANAGAGGAGCCAGTANAGGACTGTGCGGACCCAGAGGGGTTACCTC CCGGTGAAACTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGGCTGGCGGCGAAGCGCGCGGCGCGAGCGGAGGCCCGGGAGATCAGGATGAAGGAGC TGGAGCGGCAGCAGAAGGAGGTTGAAGAGAGATCAGAAAAGGACTTTGAGAAGGGCTCCC GTAGCCTGCCCAGCCTGTCGGCAGCCACCCTAGCCTCCCTTGGGGGCACCTCCTCTCGCA GAGGCAGCGGGGACACCTCCATCTCCCTTGACACCGAGGCGTCCATCAGGGAAATCAAGG ACTCCCTGGCGGAAGCGGAGGAGAAATACAAGAAGGCCATGGTCTCCAACGCGCAGCTGG ACAACGAGAAGACCAACTTCATGTACCAGGTGGACACGCTGAAGGACGTGCTGCTGGAGC TGGAGGAGCAGCTGGCCGAGTCCCGGCGGCAGCTCGAGGAGAAGAGCAAGGAGTTTGAAA GGGAGAAGCACGCCCACAGCATCCTACAGTTTCAGTTTGCTGAAGTCAAAGAGGCCCTGA AGCAAAGGGAAGAGCTGCTTGAGAAACACGGGATAATACTCAATTCAGAAACAGCCACCA ATGGCGAGACCTCAGACCCTCTCAGCCGTGTGGAACACCCAGGGTCTACGAAGATGACGA AGGAGGAGGTCGGCGCTCCCCAGGCCCCCGGGGACGGGACGCTAGGAAGAGCCAGTGAAG TGGAGGTGGCAAATGAGATGGTGGAGCGTGTGGGGAAAAGCGAGATCTTGCCGGATTCTG AGCAAGAACAGCACANAGAGGAGCCAGTANAGGACTGTGCGGACCCAGAGGGGTTACCTC CCGGTGAAACTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 238-379, gnl|bosTau2|chr22 (8193393-8193252) | |
| 238-379, gnl|canFam2|chr23 (9977604-9977814) | |
| 238-379, gnl|danRer3|chr13 (43072779-43072976) | |
| 238-379, gnl|dasNov1|scaffold_26661 (4262-4436) | |
| 238-379, gnl|echTel1|scaffold_115743 (4-169) | |
| 238-379, gnl|fr1|chrUn (200064936-200065127) | |
| 238-379, gnl|galGal2|chr2 (48142731-48142539) | |
| 238-379, gnl|hg17|chr3 (37100112-37100315) | |
| 238-379, gnl|Hg17|chr3 (37100303-37100162) | |
| 238-379, gnl|loxAfr1|scaffold_26468 (40436-40645) | |
| 238-379, gnl|mm7|chr9 (110897562-110897357) | |
| 238-379, gnl|Mm7|chr9 (110897365-110897506) | |
| 238-379, gnl|monDom2|scaffold_128 (1957443-1957244) | |
| 238-379, gnl|oryCun1|scaffold_122659 (21353-21564) | |
| 238-379, gnl|panTro1|chr2 (38206912-38207115) | |
| 238-379, gnl|rheMac2|chr2 (99478363-99478162) | |
| 238-379, gnl|rn3|chr8 (115608380-115608176) | |
| 238-379, gnl|tetNig1|chr17 (1030379-1030557) | |
| 238-379, gnl|xenTro1|scaffold_26 (3457617-3457807) | |
| 643-792, gnl|bosTau2|chr3 (84265644-84265793) | |
| 643-792, gnl|canFam2|chr25 (51379620-51379406) | |
| 643-792, gnl|canFam2|chr25 (51379355-51379697) | |
| 643-792, gnl|dasNov1|scaffold_7186 (32039-32250) | |
| 643-792, gnl|dasNov1|scaffold_7186 (32301-31968) | |
| 643-792, gnl|echTel1|scaffold_298787 (16861-16640) | |
| 643-792, gnl|echTel1|scaffold_298787 (16596-16968) | |
| 643-792, gnl|galGal2|chr7 (4601131-4601346) | |
| 643-792, gnl|galGal2|chr7 (4601384-4601094) | |
| 643-792, gnl|hg17|chr2 (238453202-238453544) | |
| 643-792, gnl|Hg17|chr2 (238453243-238453392) | |
| 643-792, gnl|hg17|chr3 (180460824-180461044) | |
| 643-792, gnl|loxAfr1|scaffold_28858 (21176-21390) | |
| 643-792, gnl|loxAfr1|scaffold_28858 (21441-21150) | |
| 643-792, gnl|mm7|chr1 (91022528-91022308) | |
| 643-792, gnl|mm7|chr1 (91022263-91022605) | |
| 643-792, gnl|Mm7|chr1 (91022304-91022453) | |
| 643-792, gnl|monDom2|scaffold_184 (953044-953265) | |
| 643-792, gnl|monDom2|scaffold_184 (953309-952955) | |
| 643-792, gnl|panTro1|chr13 (129397808-129398150) | |
| 643-792, gnl|panTro1|chr2 (184215998-184216218) | |
| 643-792, gnl|rheMac2|chr12 (101623012-101623354) | |
| 643-792, gnl|rheMac2|chr2 (107551342-107551121) | |
| 643-792, gnl|rn3|chr9 (90549227-90549009) | |
| 643-792, gnl|rn3|chr9 (90548962-90549304) | |
| 643-792, gnl|xenTro1|scaffold_49 (2625826-2626172) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 238-379, gnl|bosTau2|chr22 (8193393-8193252) | |
| 238-379, gnl|canFam2|chr23 (9977604-9977814) | |
| 238-379, gnl|danRer3|chr13 (43072779-43072976) | |
| 238-379, gnl|dasNov1|scaffold_26661 (4262-4436) | |
| 238-379, gnl|echTel1|scaffold_115743 (4-169) | |
| 238-379, gnl|fr1|chrUn (200064936-200065127) | |
| 238-379, gnl|galGal2|chr2 (48142731-48142539) | |
| 238-379, gnl|hg17|chr3 (37100112-37100315) | |
| 238-379, gnl|Hg17|chr3 (37100303-37100162) | |
| 238-379, gnl|loxAfr1|scaffold_26468 (40436-40645) | |
| 238-379, gnl|mm7|chr9 (110897562-110897357) | |
| 238-379, gnl|Mm7|chr9 (110897365-110897506) | |
| 238-379, gnl|monDom2|scaffold_128 (1957443-1957244) | |
| 238-379, gnl|oryCun1|scaffold_122659 (21353-21564) | |
| 238-379, gnl|panTro1|chr2 (38206912-38207115) | |
| 238-379, gnl|rheMac2|chr2 (99478363-99478162) | |
| 238-379, gnl|rn3|chr8 (115608380-115608176) | |
| 238-379, gnl|tetNig1|chr17 (1030379-1030557) | |
| 238-379, gnl|xenTro1|scaffold_26 (3457617-3457807) | |
| 643-792, gnl|bosTau2|chr3 (84265644-84265793) | |
| 643-792, gnl|canFam2|chr25 (51379620-51379406) | |
| 643-792, gnl|canFam2|chr25 (51379355-51379697) | |
| 643-792, gnl|dasNov1|scaffold_7186 (32039-32250) | |
| 643-792, gnl|dasNov1|scaffold_7186 (32301-31968) | |
| 643-792, gnl|echTel1|scaffold_298787 (16861-16640) | |
| 643-792, gnl|echTel1|scaffold_298787 (16596-16968) | |
| 643-792, gnl|galGal2|chr7 (4601131-4601346) | |
| 643-792, gnl|galGal2|chr7 (4601384-4601094) | |
| 643-792, gnl|hg17|chr2 (238453202-238453544) | |
| 643-792, gnl|Hg17|chr2 (238453243-238453392) | |
| 643-792, gnl|hg17|chr3 (180460824-180461044) | |
| 643-792, gnl|loxAfr1|scaffold_28858 (21176-21390) | |
| 643-792, gnl|loxAfr1|scaffold_28858 (21441-21150) | |
| 643-792, gnl|mm7|chr1 (91022528-91022308) | |
| 643-792, gnl|mm7|chr1 (91022263-91022605) | |
| 643-792, gnl|Mm7|chr1 (91022304-91022453) | |
| 643-792, gnl|monDom2|scaffold_184 (953044-953265) | |
| 643-792, gnl|monDom2|scaffold_184 (953309-952955) | |
| 643-792, gnl|panTro1|chr13 (129397808-129398150) | |
| 643-792, gnl|panTro1|chr2 (184215998-184216218) | |
| 643-792, gnl|rheMac2|chr12 (101623012-101623354) | |
| 643-792, gnl|rheMac2|chr2 (107551342-107551121) | |
| 643-792, gnl|rn3|chr9 (90549227-90549009) | |
| 643-792, gnl|rn3|chr9 (90548962-90549304) | |
| 643-792, gnl|xenTro1|scaffold_49 (2625826-2626172) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| eep (0.122564) | |
| ecc (0.115035) |