Non-Coding RNA Search

Ss1.1-Mixg-0004c05.3

Sequence:


               
               TGGTTTTCCACCTCTTCTACACATTCCTGTCAAAATAGGCTGAAAGAGGAGCTTATCTTC
TATTTTATTTTGGAATCATTAAATATGATCTTTTATTATTGTTTTCCTTTGCTTGGATAT
ACCTCTGTGTTCTCAAGATGGGAAAAGGGTTGGTCTAGAGCCTCCGTCTTTGGTTGGATG
CGACACGCCCGCAATATCACCTGTGCTCACAGAATAGGATCTGCTCTCTGCCATGAGAAA
CAATGGCATGACTCCAGAAGCACTGCTTGACCACATGTCACCCCTACCAGTGACTTGCCA
GGTGGCCTGGGCTAAGTCATTAAACTGGGCCTTGTTTGGAAAGGAAAGGGGCCAGCATTT
TATTATTTTCCAAAGCTTAAGAGTGCAAAGTTGAGAGGTTTGCAAAGCTAAGAGCTTAAG
GTAGAATTATTCCTAGAACTGTAAATCTTTTGTCTCTCTTGAGGGCTTCTTTTAAATGAG
CACTGGGTGGAAAACAACACGGGGCCAAAGACACCTTCATATCCGCATTTTGCAGATTCT
AGTGGGGCAGAATAAATGTCTTCAGCAGAATCTCTCAAAAAATTTTCCATTGAGACCATG
CCACCTAGAATCAGTTTCATAGGCAACCCGTATTCGATCCAATTCAGCAGAGGAGTAAGG
GAAAAGAATCCTTGACTTCTTTACAAGAGTGAAGTGTACTCAAGAATTAAAAACAACATT
CACCTTTGTGTCACAGGTCTACCTTTTCGTAAATCCCTTGTGTTGAATTTTCAAAGAATA
GGTCATTGTTCATGCGTGTATGATAACCATGGCTTGATTTTTCAGAGCACACCCTGCCTT
TGATTTTTGTACTTCTTGCGATGGACTCATAATAATGAGGAAGGCATGATTTGTATCTTG
CCAAGTTGAAAGCACATATTGGAACATATGAAAAAGCTACTATTAAAAGGCTAAAGGAAG
TGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTTTTCCACCTCTTCTACACATTCCTGTCAAAATAGGCTGAAAGAGGAGCTTATCTTC
TATTTTATTTTGGAATCATTAAATATGATCTTTTATTATTGTTTTCCTTTGCTTGGATAT
ACCTCTGTGTTCTCAAGATGGGAAAAGGGTTGGTCTAGAGCCTCCGTCTTTGGTTGGATG
CGACACGCCCGCAATATCACCTGTGCTCACAGAATAGGATCTGCTCTCTGCCATGAGAAA
CAATGGCATGACTCCAGAAGCACTGCTTGACCACATGTCACCCCTACCAGTGACTTGCCA
GGTGGCCTGGGCTAAGTCATTAAACTGGGCCTTGTTTGGAAAGGAAAGGGGCCAGCATTT
TATTATTTTCCAAAGCTTAAGAGTGCAAAGTTGAGAGGTTTGCAAAGCTAAGAGCTTAAG
GTAGAATTATTCCTAGAACTGTAAATCTTTTGTCTCTCTTGAGGGCTTCTTTTAAATGAG
CACTGGGTGGAAAACAACACGGGGCCAAAGACACCTTCATATCCGCATTTTGCAGATTCT
AGTGGGGCAGAATAAATGTCTTCAGCAGAATCTCTCAAAAAATTTTCCATTGAGACCATG
CCACCTAGAATCAGTTTCATAGGCAACCCGTATTCGATCCAATTCAGCAGAGGAGTAAGG
GAAAAGAATCCTTGACTTCTTTACAAGAGTGAAGTGTACTCAAGAATTAAAAACAACATT
CACCTTTGTGTCACAGGTCTACCTTTTCGTAAATCCCTTGTGTTGAATTTTCAAAGAATA
GGTCATTGTTCATGCGTGTATGATAACCATGGCTTGATTTTTCAGAGCACACCCTGCCTT
TGATTTTTGTACTTCTTGCGATGGACTCATAATAATGAGGAAGGCATGATTTGTATCTTG
CCAAGTTGAAAGCACATATTGGAACATATGAAAAAGCTACTATTAAAAGGCTAAAGGAAG
TGAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               33-950, gnl|bosTau2|chr15 (39905472-39904563)
               

               
               33-950, gnl|Hg17|chr11 (35209580-35210511)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-950, gnl|bosTau2|chr15 (39905472-39904563)
               

               
               33-950, gnl|Hg17|chr11 (35209580-35210511)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               sag (0.182715)
               

               
               rec (0.17307)
               

               
               bfe (0.149858)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               rec (0.17307)
               

               
               bfe (0.149858)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

	33-950, gnl\|bosTau2\|chr15 (39905472-39904563)
	33-950, gnl\|Hg17\|chr11 (35209580-35210511)

	sag (0.182715)
	rec (0.17307)
	bfe (0.149858)
	bla (0.124347)
	tra (0.123092)