Ss1.1-Mixg-0004d09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTACGCGGGCGTCTCAGACGGCCTCTCCCAGGCCACCTGTCCGCTTGCTGCGATGGATC GGATCATGGAAAGCGGCCACCACAAGGGCAAGCCCCGGAGCAAGTCCCCCGACAGCACCA TGCGGTCCCCCTCGTCGCCCATCCATGAAGAGGACGACTCGGAGGCTCTGCCCCCGCTGA GCAGAGCGGGGCTGGCGCTGAGCAGCTCCCCCGAGAGCTTCCTAACGGAGGAGGTTGATG AGACTGTGTCACTAAAGCAAGGGAGTCGAGTGCCGTCCATCGAGAACGTCCTGCAGGATG GCAGCCCTGAGCCTCGTGGCCGCGGCCAGTCCAGCGCCCCTGCTGACATCTACCTGCCAG CCCTGGGGCCCGGCTCCTGCTCCGGTGCTTTAGAGGAGTAAGCTGGATGGTCCACCTCCA TGGAGACGCCCCGCAGCCTGCACACCACCGGGCCCCCCCGGCCTCCACTTGGTGGCCCCA GTCCTGACCCTGGGGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCTGGCTCCCCGGA CTTGGCCGAGGGCCGTGGACTCCAGCGCAACCCCTGGCCTCTCCAGTCTGCAGGTTCTGC GTGGTCACTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTACGCGGGCGTCTCAGACGGCCTCTCCCAGGCCACCTGTCCGCTTGCTGCGATGGATC GGATCATGGAAAGCGGCCACCACAAGGGCAAGCCCCGGAGCAAGTCCCCCGACAGCACCA TGCGGTCCCCCTCGTCGCCCATCCATGAAGAGGACGACTCGGAGGCTCTGCCCCCGCTGA GCAGAGCGGGGCTGGCGCTGAGCAGCTCCCCCGAGAGCTTCCTAACGGAGGAGGTTGATG AGACTGTGTCACTAAAGCAAGGGAGTCGAGTGCCGTCCATCGAGAACGTCCTGCAGGATG GCAGCCCTGAGCCTCGTGGCCGCGGCCAGTCCAGCGCCCCTGCTGACATCTACCTGCCAG CCCTGGGGCCCGGCTCCTGCTCCGGTGCTTTAGAGGAGTAAGCTGGATGGTCCACCTCCA TGGAGACGCCCCGCAGCCTGCACACCACCGGGCCCCCCCGGCCTCCACTTGGTGGCCCCA GTCCTGACCCTGGGGCCGCCGAGCTGACCCCACTCTGAGAGCCTGGCCTGGCTCCCCGGA CTTGGCCGAGGGCCGTGGACTCCAGCGCAACCCCTGGCCTCTCCAGTCTGCAGGTTCTGC GTGGTCACTGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 3-115, gnl|bosTau2|chr25 (4608719-4608831) | |
| 3-115, gnl|canFam2|chr6 (39767199-39766985) | |
| 3-115, gnl|danRer3|chr12 (15018579-15018777) | |
| 3-115, gnl|dasNov1|scaffold_63223 (2246-2459) | |
| 3-115, gnl|echTel1|scaffold_283454 (4886-4672) | |
| 3-115, gnl|fr1|chrUn (67600955-67601155) | |
| 3-115, gnl|galGal2|chr14 (14186044-14185833) | |
| 3-115, gnl|hg17|chr16 (4671571-4671785) | |
| 3-115, gnl|Hg17|chr16 (4671666-4671778) | |
| 3-115, gnl|loxAfr1|scaffold_231325 (840-626) | |
| 3-115, gnl|mm7|chr16 (4601158-4601374) | |
| 3-115, gnl|Mm7|chr16 (4601253-4601365) | |
| 3-115, gnl|monDom2|scaffold_17 (42895304-42895093) | |
| 3-115, gnl|oryCun1|scaffold_188243 (4545-4331) | |
| 3-115, gnl|panTro1|chr18 (4621172-4621386) | |
| 3-115, gnl|rheMac2|chr20 (4845610-4845824) | |
| 3-115, gnl|rn3|chr10 (10765148-10764932) | |
| 3-115, gnl|tetNig1|chr3 (11789827-11789623) | |
| 260-360, gnl|bosTau2|chr25 (4610856-4610956) | |
| 260-360, gnl|canFam2|chr6 (39763564-39763431) | |
| 260-360, gnl|echTel1|scaffold_283454 (2637-2517) | |
| 260-360, gnl|fr1|chrUn (67601545-67601669) | |
| 260-360, gnl|hg17|chr16 (4673818-4673942) | |
| 260-360, gnl|Hg17|chr16 (4673843-4673934) | |
| 260-360, gnl|mm7|chr16 (4605634-4605770) | |
| 260-360, gnl|Mm7|chr16 (4605662-4605762) | |
| 260-360, gnl|monDom2|scaffold_17 (42890819-42890677) | |
| 260-360, gnl|oryCun1|scaffold_188243 (1666-1550) | |
| 260-360, gnl|panTro1|chr18 (4623475-4623600) | |
| 260-360, gnl|rheMac2|chr20 (4847836-4847960) | |
| 260-360, gnl|rn3|chr10 (10761233-10761097) | |
| 402-612, gnl|bosTau2|chr25 (4613683-4613893) | |
| 402-612, gnl|Hg17|chr16 (4678794-4679026) | |
| 402-612, gnl|Mm7|chr16 (4610356-4610591) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-115, gnl|bosTau2|chr25 (4608719-4608831) | |
| 3-115, gnl|canFam2|chr6 (39767199-39766985) | |
| 3-115, gnl|danRer3|chr12 (15018579-15018777) | |
| 3-115, gnl|dasNov1|scaffold_63223 (2246-2459) | |
| 3-115, gnl|echTel1|scaffold_283454 (4886-4672) | |
| 3-115, gnl|fr1|chrUn (67600955-67601155) | |
| 3-115, gnl|galGal2|chr14 (14186044-14185833) | |
| 3-115, gnl|hg17|chr16 (4671571-4671785) | |
| 3-115, gnl|Hg17|chr16 (4671666-4671778) | |
| 3-115, gnl|loxAfr1|scaffold_231325 (840-626) | |
| 3-115, gnl|mm7|chr16 (4601158-4601374) | |
| 3-115, gnl|Mm7|chr16 (4601253-4601365) | |
| 3-115, gnl|monDom2|scaffold_17 (42895304-42895093) | |
| 3-115, gnl|oryCun1|scaffold_188243 (4545-4331) | |
| 3-115, gnl|panTro1|chr18 (4621172-4621386) | |
| 3-115, gnl|rheMac2|chr20 (4845610-4845824) | |
| 3-115, gnl|rn3|chr10 (10765148-10764932) | |
| 3-115, gnl|tetNig1|chr3 (11789827-11789623) | |
| 260-360, gnl|bosTau2|chr25 (4610856-4610956) | |
| 260-360, gnl|canFam2|chr6 (39763564-39763431) | |
| 260-360, gnl|echTel1|scaffold_283454 (2637-2517) | |
| 260-360, gnl|fr1|chrUn (67601545-67601669) | |
| 260-360, gnl|hg17|chr16 (4673818-4673942) | |
| 260-360, gnl|Hg17|chr16 (4673843-4673934) | |
| 260-360, gnl|mm7|chr16 (4605634-4605770) | |
| 260-360, gnl|Mm7|chr16 (4605662-4605762) | |
| 260-360, gnl|monDom2|scaffold_17 (42890819-42890677) | |
| 260-360, gnl|oryCun1|scaffold_188243 (1666-1550) | |
| 260-360, gnl|panTro1|chr18 (4623475-4623600) | |
| 260-360, gnl|rheMac2|chr20 (4847836-4847960) | |
| 260-360, gnl|rn3|chr10 (10761233-10761097) | |
| 402-612, gnl|bosTau2|chr25 (4613683-4613893) | |
| 402-612, gnl|Hg17|chr16 (4678794-4679026) | |
| 402-612, gnl|Mm7|chr16 (4610356-4610591) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |