Non-Coding RNA Search

Ss1.1-Mixg-0004h08.3

Sequence:


               
               AAAAACCTATTGGAGGAAATATCATTGCTCATGCCTCAACAACAAGACTATACCTGAGAA
AAGGAAGAGGGGAAACAAGAATCTGCAAAATCTATGACTCTCCTTGTCTTCCTGAAGCTG
AAGCTATGTTTGCCATCAATGCGGATGGAGTGGGAGATGCCAAAGACTGAATCATTGGGA
TTTTTACCCTGTGACAAACCTGAAGTGCTGCAGCCTAATGGAGAGGACTGCTCCCTGGGG
TTCTTCCCAGGCCTCTTTCAGCTGTGACTGCCAGGAAAAGGCTTCCAGGAAAACAGCTAT
TATATTGGCTTTTTTATGGTGTAAACACGAGCAGGTCAGTAGTCACAAGCTGATCTGAAA
TGTTTATTCCTTCTAGAGTGTATTAATCTCTCTGTGAATTCTTTGGTTTTGGGGGGTAGG
TATGAAATACCTTTGACATCATAGTGCCTTGGAGTTGACTCAGGATTAACTGCTGTCTAC
TAGACAGTCTTAGGTCTCTTGAAGAACTAAAGCTAGGGAGGCAGGCATGACTTCTCTCAC
TGTCTGAATAATGTTGAAAAAAAAAAGATGCCTGAGCTATGTACAAAGAGAATGGATCTC
CTCACAGGTTTCTTTTTCTCTGTTTATAAAACTGTTAAGTCAGAAGCAGGTTTTTAAGTT
TGTGTTTCTGAATTATCGTATATAAGAATTCACTGTTAGATAAGGGTATGGAGTAGGCCC
GCTGGGCCAACAGCTCTTTATCACTTACTTGATTTTTTAATGCTAAGGCAATTCAAGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAACCTATTGGAGGAAATATCATTGCTCATGCCTCAACAACAAGACTATACCTGAGAA
AAGGAAGAGGGGAAACAAGAATCTGCAAAATCTATGACTCTCCTTGTCTTCCTGAAGCTG
AAGCTATGTTTGCCATCAATGCGGATGGAGTGGGAGATGCCAAAGACTGAATCATTGGGA
TTTTTACCCTGTGACAAACCTGAAGTGCTGCAGCCTAATGGAGAGGACTGCTCCCTGGGG
TTCTTCCCAGGCCTCTTTCAGCTGTGACTGCCAGGAAAAGGCTTCCAGGAAAACAGCTAT
TATATTGGCTTTTTTATGGTGTAAACACGAGCAGGTCAGTAGTCACAAGCTGATCTGAAA
TGTTTATTCCTTCTAGAGTGTATTAATCTCTCTGTGAATTCTTTGGTTTTGGGGGGTAGG
TATGAAATACCTTTGACATCATAGTGCCTTGGAGTTGACTCAGGATTAACTGCTGTCTAC
TAGACAGTCTTAGGTCTCTTGAAGAACTAAAGCTAGGGAGGCAGGCATGACTTCTCTCAC
TGTCTGAATAATGTTGAAAAAAAAAAGATGCCTGAGCTATGTACAAAGAGAATGGATCTC
CTCACAGGTTTCTTTTTCTCTGTTTATAAAACTGTTAAGTCAGAAGCAGGTTTTTAAGTT
TGTGTTTCTGAATTATCGTATATAAGAATTCACTGTTAGATAAGGGTATGGAGTAGGCCC
GCTGGGCCAACAGCTCTTTATCACTTACTTGATTTTTTAATGCTAAGGCAATTCAAGAGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               45-690, gnl|bosTau2|chr10 (26625401-26626029)
               

               
               45-690, gnl|Hg17|chr15 (38810543-38811172)
               

               
               45-690, gnl|Mm7|chr2 (118875896-118876449)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-690, gnl|bosTau2|chr10 (26625401-26626029)
               

               
               45-690, gnl|Hg17|chr15 (38810543-38811172)
               

               
               45-690, gnl|Mm7|chr2 (118875896-118876449)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               spl (0.143184)

	45-690, gnl\|bosTau2\|chr10 (26625401-26626029)
	45-690, gnl\|Hg17\|chr15 (38810543-38811172)
	45-690, gnl\|Mm7\|chr2 (118875896-118876449)