Ss1.1-Mixg-0006a05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCAGCTCCACGGACTACCAAGAAAGCATGGACACAGACAAAGATGACCCTCATGGAAG GTTAGAGTACACAGAGCACCAAGGAAGGATCAAAAATGCCAGGGAAGCTCACAGTCAGAT TGAAAAGAGGCGTCGGGATAAGATGAACAGTTTCATCGACGAACTGGCTTCTTTGGTACC AACGTGCAACGCGATGTCCAGGAAATTAGATAAACTTACTGTGCTAAGGATGGCCGTTCA GCACATGAAAACGTTACGAGGTGCCACCAATCCATACACAGAAGCAAACTACAAACCGAC CTTTCTGTCAGATGATGAATTGAAACACCTTATTCTCAGGGCAGCAGATGGATTTTTGTT TGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTGTCAGAGTCTGTCTTCAAGATCCT CAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTATTTGACTACCTGCATCCTAAAGA TATCGCCAAAGTCAAGGAGCAGCTCTCCTCCTCCGACACCGCACCCCGGGAACGGCTCAT AGACGCAAAAACGGGACTTCCAGTTAAAACAGATATAACCCCCGGGCCATCTCGATTATG TTCTGGAGCACGGCGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCAGCTCCACGGACTACCAAGAAAGCATGGACACAGACAAAGATGACCCTCATGGAAG GTTAGAGTACACAGAGCACCAAGGAAGGATCAAAAATGCCAGGGAAGCTCACAGTCAGAT TGAAAAGAGGCGTCGGGATAAGATGAACAGTTTCATCGACGAACTGGCTTCTTTGGTACC AACGTGCAACGCGATGTCCAGGAAATTAGATAAACTTACTGTGCTAAGGATGGCCGTTCA GCACATGAAAACGTTACGAGGTGCCACCAATCCATACACAGAAGCAAACTACAAACCGAC CTTTCTGTCAGATGATGAATTGAAACACCTTATTCTCAGGGCAGCAGATGGATTTTTGTT TGTCGTAGGATGTGACCGAGGGAAGATACTCTTTGTGTCAGAGTCTGTCTTCAAGATCCT CAACTACAGCCAGAATGATCTGATTGGTCAGAGTTTATTTGACTACCTGCATCCTAAAGA TATCGCCAAAGTCAAGGAGCAGCTCTCCTCCTCCGACACCGCACCCCGGGAACGGCTCAT AGACGCAAAAACGGGACTTCCAGTTAAAACAGATATAACCCCCGGGCCATCTCGATTATG TTCTGGAGCACGGCGTTCTTTCTTCTGTAGGATGAAGTGTAACAGGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 100-263, gnl|bosTau2|chr15 (23369835-23369672) | |
| 100-263, gnl|Hg17|chr11 (13336554-13336717) | |
| 100-263, gnl|Mm7|chr7 (109201020-109201183) | |
| 431-560, gnl|bosTau2|chr15 (23361894-23361766) | |
| 431-560, gnl|canFam2|chr21 (39496472-39496606) | |
| 431-560, gnl|danRer3|chr7 (54763061-54762913) | |
| 431-560, gnl|dasNov1|scaffold_1106 (32900-32766) | |
| 431-560, gnl|echTel1|scaffold_137226 (217-355) | |
| 431-560, gnl|fr1|chrUn (274373690-274373558) | |
| 431-560, gnl|galGal2|chr5 (5094165-5094033) | |
| 431-560, gnl|hg17|chr11 (13344780-13344917) | |
| 431-560, gnl|Hg17|chr11 (13344785-13344913) | |
| 431-560, gnl|loxAfr1|scaffold_196547 (948-1085) | |
| 431-560, gnl|mm7|chr7 (109209195-109209332) | |
| 431-560, gnl|Mm7|chr7 (109209200-109209328) | |
| 431-560, gnl|monDom2|scaffold_10 (64136832-64136965) | |
| 431-560, gnl|oryCun1|scaffold_204614 (7372-7244) | |
| 431-560, gnl|panTro1|chr9 (13608655-13608792) | |
| 431-560, gnl|rheMac2|chr14 (58522428-58522291) | |
| 431-560, gnl|rn3|chr1 (171263423-171263560) | |
| 431-560, gnl|tetNig1|chr13 (515750-515606) | |
| 431-560, gnl|xenTro1|scaffold_37 (2779209-2779072) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 100-263, gnl|bosTau2|chr15 (23369835-23369672) | |
| 100-263, gnl|Hg17|chr11 (13336554-13336717) | |
| 100-263, gnl|Mm7|chr7 (109201020-109201183) | |
| 431-560, gnl|bosTau2|chr15 (23361894-23361766) | |
| 431-560, gnl|canFam2|chr21 (39496472-39496606) | |
| 431-560, gnl|danRer3|chr7 (54763061-54762913) | |
| 431-560, gnl|dasNov1|scaffold_1106 (32900-32766) | |
| 431-560, gnl|echTel1|scaffold_137226 (217-355) | |
| 431-560, gnl|fr1|chrUn (274373690-274373558) | |
| 431-560, gnl|galGal2|chr5 (5094165-5094033) | |
| 431-560, gnl|hg17|chr11 (13344780-13344917) | |
| 431-560, gnl|Hg17|chr11 (13344785-13344913) | |
| 431-560, gnl|loxAfr1|scaffold_196547 (948-1085) | |
| 431-560, gnl|mm7|chr7 (109209195-109209332) | |
| 431-560, gnl|Mm7|chr7 (109209200-109209328) | |
| 431-560, gnl|monDom2|scaffold_10 (64136832-64136965) | |
| 431-560, gnl|oryCun1|scaffold_204614 (7372-7244) | |
| 431-560, gnl|panTro1|chr9 (13608655-13608792) | |
| 431-560, gnl|rheMac2|chr14 (58522428-58522291) | |
| 431-560, gnl|rn3|chr1 (171263423-171263560) | |
| 431-560, gnl|tetNig1|chr13 (515750-515606) | |
| 431-560, gnl|xenTro1|scaffold_37 (2779209-2779072) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |