Ss1.1-Mixg-0006e03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTTCTCCATTATCCTGGTTCCGGGGCTTGGAGGATGATGCTGTGGTTGCAGAACTTGGG CTGGACTTTCAGAGATTCCTGACCCTGAACCGGACCTTGCTAGTGGCTGCCCGGGATCAT GTTTTCTCCTTTGATCTTCAAGCCCAAGAAGAAGGGGAGGGCCTAGTGCCTAACAAGTAT CTAACATGGAGGAGCCAAGACATGGAGAACTGTGCCGTGCGGGGGAAGCTGACGGACGAA TGCTACAACTACATTCGTGTTCTTGTTCCCTGGAACTCCCAGACACTCCTTGCCTGTGGA ACGAACTCATTCAGCCCCATGTGCCGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGT GAGGAGCTGAGTGGGCAGGCTCGATGCCCCTTTGATGCCACCCAATCCAATGTGGCCGTC TTTGCAGAGGGCAGCCTGTATTCAGCCACAGCTGCGGATTTCCAAGCCAGTGATGCTGTG GTTTACAGAAGCCTTGGGCCTCAGCCCCCACTCCGCTCCGCCAAGTACGACTCCAAGTGG CTCCGAGAGCCACACTTTGTCCATGCTTTGGAGCATGGAGACCACGTCTACTTCTTCTTC CGAGAGGTCTCTGTGGAGGATGCTCGGCTGGGGAGGGTGCAGTTCTCCCGTGTGGCCCGC GTATGTAAGCGTGACATGGGAGGCTCACCTCGGGCCCCTGAAGCTGCGGCTCAACTGCTC TGTCCCTGGGGACTCTACCTTCTAGTCCCTGGGGACACAGGCCTTGACAGGGCCTGTGAA CTTGTATGGCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTTCTCCATTATCCTGGTTCCGGGGCTTGGAGGATGATGCTGTGGTTGCAGAACTTGGG CTGGACTTTCAGAGATTCCTGACCCTGAACCGGACCTTGCTAGTGGCTGCCCGGGATCAT GTTTTCTCCTTTGATCTTCAAGCCCAAGAAGAAGGGGAGGGCCTAGTGCCTAACAAGTAT CTAACATGGAGGAGCCAAGACATGGAGAACTGTGCCGTGCGGGGGAAGCTGACGGACGAA TGCTACAACTACATTCGTGTTCTTGTTCCCTGGAACTCCCAGACACTCCTTGCCTGTGGA ACGAACTCATTCAGCCCCATGTGCCGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGT GAGGAGCTGAGTGGGCAGGCTCGATGCCCCTTTGATGCCACCCAATCCAATGTGGCCGTC TTTGCAGAGGGCAGCCTGTATTCAGCCACAGCTGCGGATTTCCAAGCCAGTGATGCTGTG GTTTACAGAAGCCTTGGGCCTCAGCCCCCACTCCGCTCCGCCAAGTACGACTCCAAGTGG CTCCGAGAGCCACACTTTGTCCATGCTTTGGAGCATGGAGACCACGTCTACTTCTTCTTC CGAGAGGTCTCTGTGGAGGATGCTCGGCTGGGGAGGGTGCAGTTCTCCCGTGTGGCCCGC GTATGTAAGCGTGACATGGGAGGCTCACCTCGGGCCCCTGAAGCTGCGGCTCAACTGCTC TGTCCCTGGGGACTCTACCTTCTAGTCCCTGGGGACACAGGCCTTGACAGGGCCTGTGAA CTTGTATGGCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 1-114, gnl|bosTau2|chr3 (16465518-16465631) | |
| 1-114, gnl|canFam2|chr17 (63282099-63282239) | |
| 1-114, gnl|danRer3|chrNA (172057077-172057206) | |
| 1-114, gnl|echTel1|scaffold_312232 (96504-96360) | |
| 1-114, gnl|fr1|chrUn (230685333-230685469) | |
| 1-114, gnl|hg17|chr1 (147925521-147925664) | |
| 1-114, gnl|Hg17|chr1 (147925637-147925524) | |
| 1-114, gnl|mm7|chr3 (95041075-95040937) | |
| 1-114, gnl|Mm7|chr3 (95040957-95041070) | |
| 1-114, gnl|monDom2|scaffold_44 (4323278-4323418) | |
| 1-114, gnl|oryCun1|scaffold_182830 (4485-4628) | |
| 1-114, gnl|panTro1|chr1 (129660303-129660446) | |
| 1-114, gnl|rheMac2|chr1 (129564804-129564947) | |
| 1-114, gnl|rn3|chr2 (190035123-190034986) | |
| 234-339, gnl|bosTau2|chr3 (16466562-16466667) | |
| 234-339, gnl|canFam2|chr17 (63281136-63281221) | |
| 234-339, gnl|danRer3|chrNA (172055399-172055483) | |
| 234-339, gnl|dasNov1|scaffold_77 (141495-141580) | |
| 234-339, gnl|echTel1|scaffold_237765 (1286-1201) | |
| 234-339, gnl|fr1|chrUn (230684223-230684308) | |
| 234-339, gnl|galGal2|chr10 (10465440-10465355) | |
| 234-339, gnl|hg17|chr1 (147924177-147924262) | |
| 234-339, gnl|Hg17|chr1 (147924281-147924176) | |
| 234-339, gnl|loxAfr1|scaffold_57374 (238-153) | |
| 234-339, gnl|mm7|chr3 (95042053-95041968) | |
| 234-339, gnl|Mm7|chr3 (95041947-95042052) | |
| 234-339, gnl|monDom2|scaffold_44 (4322332-4322417) | |
| 234-339, gnl|oryCun1|scaffold_182830 (3493-3578) | |
| 234-339, gnl|panTro1|chr1 (129658964-129659049) | |
| 234-339, gnl|rheMac2|chr1 (129563448-129563533) | |
| 234-339, gnl|rn3|chr2 (190036069-190035984) | |
| 234-339, gnl|tetNig1|chrUn_random (40979551-40979635) | |
| 234-339, gnl|xenTro1|scaffold_27 (2416816-2416731) | |
| 425-547, gnl|bosTau2|chr3 (16467175-16467297) | |
| 425-547, gnl|canFam2|chr17 (63280526-63280656) | |
| 425-547, gnl|danRer3|chrNA (172054570-172054702) | |
| 425-547, gnl|dasNov1|scaffold_423 (94777-94903) | |
| 425-547, gnl|echTel1|scaffold_237765 (1956-1826) | |
| 425-547, gnl|fr1|chrUn (230683794-230683924) | |
| 425-547, gnl|galGal2|chr10 (10466154-10466027) | |
| 425-547, gnl|hg17|chr1 (147923530-147923660) | |
| 425-547, gnl|Hg17|chr1 (147923657-147923535) | |
| 425-547, gnl|loxAfr1|scaffold_57374 (857-727) | |
| 425-547, gnl|mm7|chr3 (95042661-95042532) | |
| 425-547, gnl|Mm7|chr3 (95042533-95042655) | |
| 425-547, gnl|monDom2|scaffold_44 (4320978-4321108) | |
| 425-547, gnl|oryCun1|scaffold_121481 (6319-6193) | |
| 425-547, gnl|panTro1|chr1 (129658317-129658447) | |
| 425-547, gnl|rheMac2|chr1 (129562801-129562931) | |
| 425-547, gnl|rn3|chr2 (190036665-190036536) | |
| 425-547, gnl|tetNig1|chrUn_random (40977798-40977928) | |
| 425-547, gnl|xenTro1|scaffold_96 (1860648-1860515) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-114, gnl|bosTau2|chr3 (16465518-16465631) | |
| 1-114, gnl|canFam2|chr17 (63282099-63282239) | |
| 1-114, gnl|danRer3|chrNA (172057077-172057206) | |
| 1-114, gnl|echTel1|scaffold_312232 (96504-96360) | |
| 1-114, gnl|fr1|chrUn (230685333-230685469) | |
| 1-114, gnl|hg17|chr1 (147925521-147925664) | |
| 1-114, gnl|Hg17|chr1 (147925637-147925524) | |
| 1-114, gnl|mm7|chr3 (95041075-95040937) | |
| 1-114, gnl|Mm7|chr3 (95040957-95041070) | |
| 1-114, gnl|monDom2|scaffold_44 (4323278-4323418) | |
| 1-114, gnl|oryCun1|scaffold_182830 (4485-4628) | |
| 1-114, gnl|panTro1|chr1 (129660303-129660446) | |
| 1-114, gnl|rheMac2|chr1 (129564804-129564947) | |
| 1-114, gnl|rn3|chr2 (190035123-190034986) | |
| 234-339, gnl|bosTau2|chr3 (16466562-16466667) | |
| 234-339, gnl|canFam2|chr17 (63281136-63281221) | |
| 234-339, gnl|danRer3|chrNA (172055399-172055483) | |
| 234-339, gnl|dasNov1|scaffold_77 (141495-141580) | |
| 234-339, gnl|echTel1|scaffold_237765 (1286-1201) | |
| 234-339, gnl|fr1|chrUn (230684223-230684308) | |
| 234-339, gnl|galGal2|chr10 (10465440-10465355) | |
| 234-339, gnl|hg17|chr1 (147924177-147924262) | |
| 234-339, gnl|Hg17|chr1 (147924281-147924176) | |
| 234-339, gnl|loxAfr1|scaffold_57374 (238-153) | |
| 234-339, gnl|mm7|chr3 (95042053-95041968) | |
| 234-339, gnl|Mm7|chr3 (95041947-95042052) | |
| 234-339, gnl|monDom2|scaffold_44 (4322332-4322417) | |
| 234-339, gnl|oryCun1|scaffold_182830 (3493-3578) | |
| 234-339, gnl|panTro1|chr1 (129658964-129659049) | |
| 234-339, gnl|rheMac2|chr1 (129563448-129563533) | |
| 234-339, gnl|rn3|chr2 (190036069-190035984) | |
| 234-339, gnl|tetNig1|chrUn_random (40979551-40979635) | |
| 234-339, gnl|xenTro1|scaffold_27 (2416816-2416731) | |
| 425-547, gnl|bosTau2|chr3 (16467175-16467297) | |
| 425-547, gnl|canFam2|chr17 (63280526-63280656) | |
| 425-547, gnl|danRer3|chrNA (172054570-172054702) | |
| 425-547, gnl|dasNov1|scaffold_423 (94777-94903) | |
| 425-547, gnl|echTel1|scaffold_237765 (1956-1826) | |
| 425-547, gnl|fr1|chrUn (230683794-230683924) | |
| 425-547, gnl|galGal2|chr10 (10466154-10466027) | |
| 425-547, gnl|hg17|chr1 (147923530-147923660) | |
| 425-547, gnl|Hg17|chr1 (147923657-147923535) | |
| 425-547, gnl|loxAfr1|scaffold_57374 (857-727) | |
| 425-547, gnl|mm7|chr3 (95042661-95042532) | |
| 425-547, gnl|Mm7|chr3 (95042533-95042655) | |
| 425-547, gnl|monDom2|scaffold_44 (4320978-4321108) | |
| 425-547, gnl|oryCun1|scaffold_121481 (6319-6193) | |
| 425-547, gnl|panTro1|chr1 (129658317-129658447) | |
| 425-547, gnl|rheMac2|chr1 (129562801-129562931) | |
| 425-547, gnl|rn3|chr2 (190036665-190036536) | |
| 425-547, gnl|tetNig1|chrUn_random (40977798-40977928) | |
| 425-547, gnl|xenTro1|scaffold_96 (1860648-1860515) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |