Ss1.1-Mixg-0007c10.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAGGCACTGGGGAGGCTGGCGAGGAAGGACGCCCGTGCCGCCAGACTGGAGCAGTGGCA GAAGGCCGTGCCCTGATGCCCCTTCCTGCTCCTCCCACAGAAGGAGCTGGCGGAGGCGAA GCACCAGTACAGCCTCGACGAGCTGAAGCACCGCGAGAACCTGCTTCAGGCCCAGCAGGA AGATGAGCAGGCCCGGCGGGAGGAGCTGGAGGAGCACAAGGCTGCCTTCGTGGAGAATCT GAACGGCCCCTTCCTCTTTGAGAGCATGTATGCTGAGGACGTGGAGGGCAGCAAGCTGGC CTGCCTGCCCGGCGTGGGCGAGCTCCTGGAGACCTACAGGGACAAGTTCGTCATCATCTG CCTGAACCTATTTGAGTGCGGCCTGAAGCAGCAGGAGAAGCGCAAGGCGGAGCTGGACAC CTTCAGCCAGTGTGTCCAGGAGGCCATCCAGGAGAACCAGGAGCAGGGCAGGCAAAGGAT CACCAAGTTTGAGGAGACACACCTGCTGAGCCTGAGTGCCATCCGGGACGCGTCTGAACT GACCACCTTGGAGACGAGGCTAGTGGCGTGCAGAGAGCGCGTCGCCGAGCTGTTCAACTC GCTCATGATGCTGGAGATGCAGCTGGCGGAGCAGCTGGAGGAGACCATAAGCCTATTTGA AAGGAACATCGCCGACCTGGTGGGACTGTTCGTTGAAAACGTCCAAAGCCTGATGGCTCA GTGCCGGGACCTGGAGAACCACCACCACGAGAAGCTCCTGGAGGCCGCCATCAACACCCT GGAGAAGACGGTCAAGGGCGAGCTGGACGAGGACCTGCCCGACGACGTGCGGGCGCTCTT TGTCGACAAAGACACGCTGGTCAATGCGGTCGGGGCGTCGCACGACGTCCACCTCCTCAA GATCGACAGTCGGGAGGACGAGCTGGTGACCAAGGTCCACGCCTGGTGCACACACCTGCT GGACCAAATCCACAGGGACGAGATCGCGAGGAACCGCAAGCGCGTGAAGGAGATCAGCCA GGACACAGACTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAGGCACTGGGGAGGCTGGCGAGGAAGGACGCCCGTGCCGCCAGACTGGAGCAGTGGCA GAAGGCCGTGCCCTGATGCCCCTTCCTGCTCCTCCCACAGAAGGAGCTGGCGGAGGCGAA GCACCAGTACAGCCTCGACGAGCTGAAGCACCGCGAGAACCTGCTTCAGGCCCAGCAGGA AGATGAGCAGGCCCGGCGGGAGGAGCTGGAGGAGCACAAGGCTGCCTTCGTGGAGAATCT GAACGGCCCCTTCCTCTTTGAGAGCATGTATGCTGAGGACGTGGAGGGCAGCAAGCTGGC CTGCCTGCCCGGCGTGGGCGAGCTCCTGGAGACCTACAGGGACAAGTTCGTCATCATCTG CCTGAACCTATTTGAGTGCGGCCTGAAGCAGCAGGAGAAGCGCAAGGCGGAGCTGGACAC CTTCAGCCAGTGTGTCCAGGAGGCCATCCAGGAGAACCAGGAGCAGGGCAGGCAAAGGAT CACCAAGTTTGAGGAGACACACCTGCTGAGCCTGAGTGCCATCCGGGACGCGTCTGAACT GACCACCTTGGAGACGAGGCTAGTGGCGTGCAGAGAGCGCGTCGCCGAGCTGTTCAACTC GCTCATGATGCTGGAGATGCAGCTGGCGGAGCAGCTGGAGGAGACCATAAGCCTATTTGA AAGGAACATCGCCGACCTGGTGGGACTGTTCGTTGAAAACGTCCAAAGCCTGATGGCTCA GTGCCGGGACCTGGAGAACCACCACCACGAGAAGCTCCTGGAGGCCGCCATCAACACCCT GGAGAAGACGGTCAAGGGCGAGCTGGACGAGGACCTGCCCGACGACGTGCGGGCGCTCTT TGTCGACAAAGACACGCTGGTCAATGCGGTCGGGGCGTCGCACGACGTCCACCTCCTCAA GATCGACAGTCGGGAGGACGAGCTGGTGACCAAGGTCCACGCCTGGTGCACACACCTGCT GGACCAAATCCACAGGGACGAGATCGCGAGGAACCGCAAGCGCGTGAAGGAGATCAGCCA GGACACAGACTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 77-221, gnl|bosTau2|chr19 (24479096-24479240) | |
| 77-221, gnl|Hg17|chr17 (17838315-17838458) | |
| 77-221, gnl|Mm7|chr11 (60456613-60456756) | |
| 332-508, gnl|bosTau2|chr19 (24480913-24481089) | |
| 332-508, gnl|canFam2|chr5 (44514575-44514192) | |
| 332-508, gnl|hg17|chr17 (17841421-17841796) | |
| 332-508, gnl|Hg17|chr17 (17841497-17841673) | |
| 332-508, gnl|loxAfr1|scaffold_6130 (90289-90733) | |
| 332-508, gnl|mm7|chr11 (60459299-60459623) | |
| 332-508, gnl|Mm7|chr11 (60459366-60459542) | |
| 332-508, gnl|oryCun1|scaffold_81232 (6212-5868) | |
| 332-508, gnl|panTro1|chr19 (18248137-18248512) | |
| 332-508, gnl|rheMac2|chr16 (17911704-17912079) | |
| 332-508, gnl|rn3|chr10 (46660607-46660931) | |
| 712-842, gnl|bosTau2|chr19 (24486921-24487051) | |
| 712-842, gnl|canFam2|chr5 (44506163-44506017) | |
| 712-842, gnl|danRer3|chrNA (18739134-18739281) | |
| 712-842, gnl|dasNov1|scaffold_48212 (8354-8206) | |
| 712-842, gnl|echTel1|scaffold_301482 (39-186) | |
| 712-842, gnl|galGal2|chr14 (7052068-7052216) | |
| 712-842, gnl|hg17|chr17 (17851042-17851190) | |
| 712-842, gnl|Hg17|chr17 (17851063-17851193) | |
| 712-842, gnl|mm7|chr11 (60470349-60470498) | |
| 712-842, gnl|Mm7|chr11 (60470371-60470501) | |
| 712-842, gnl|monDom2|scaffold_55 (12567552-12567404) | |
| 712-842, gnl|oryCun1|scaffold_136746 (1364-1216) | |
| 712-842, gnl|panTro1|chr19 (18258020-18258168) | |
| 712-842, gnl|rheMac2|chr16 (17921511-17921659) | |
| 712-842, gnl|rn3|chr10 (46671040-46671189) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 77-221, gnl|bosTau2|chr19 (24479096-24479240) | |
| 77-221, gnl|Hg17|chr17 (17838315-17838458) | |
| 77-221, gnl|Mm7|chr11 (60456613-60456756) | |
| 332-508, gnl|bosTau2|chr19 (24480913-24481089) | |
| 332-508, gnl|canFam2|chr5 (44514575-44514192) | |
| 332-508, gnl|hg17|chr17 (17841421-17841796) | |
| 332-508, gnl|Hg17|chr17 (17841497-17841673) | |
| 332-508, gnl|loxAfr1|scaffold_6130 (90289-90733) | |
| 332-508, gnl|mm7|chr11 (60459299-60459623) | |
| 332-508, gnl|Mm7|chr11 (60459366-60459542) | |
| 332-508, gnl|oryCun1|scaffold_81232 (6212-5868) | |
| 332-508, gnl|panTro1|chr19 (18248137-18248512) | |
| 332-508, gnl|rheMac2|chr16 (17911704-17912079) | |
| 332-508, gnl|rn3|chr10 (46660607-46660931) | |
| 712-842, gnl|bosTau2|chr19 (24486921-24487051) | |
| 712-842, gnl|canFam2|chr5 (44506163-44506017) | |
| 712-842, gnl|danRer3|chrNA (18739134-18739281) | |
| 712-842, gnl|dasNov1|scaffold_48212 (8354-8206) | |
| 712-842, gnl|echTel1|scaffold_301482 (39-186) | |
| 712-842, gnl|galGal2|chr14 (7052068-7052216) | |
| 712-842, gnl|hg17|chr17 (17851042-17851190) | |
| 712-842, gnl|Hg17|chr17 (17851063-17851193) | |
| 712-842, gnl|mm7|chr11 (60470349-60470498) | |
| 712-842, gnl|Mm7|chr11 (60470371-60470501) | |
| 712-842, gnl|monDom2|scaffold_55 (12567552-12567404) | |
| 712-842, gnl|oryCun1|scaffold_136746 (1364-1216) | |
| 712-842, gnl|panTro1|chr19 (18258020-18258168) | |
| 712-842, gnl|rheMac2|chr16 (17921511-17921659) | |
| 712-842, gnl|rn3|chr10 (46671040-46671189) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| pty (0.142714) |