Ss1.1-Mixg-0008,a11.3
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GCTGAGAAGTCCTTTATCTTTTCCCCCACTTGTATTTCCTTTTTTCTGTCCACCTCAGTG
GAAACAGCACACGGTTAAGCCTTTTCCTGCTACAACTACAGTGTACTTGAGCCTGTCCCC
TCAGGGACATGGAGGATTGCCAGAGATGATCCGAACTTAGAGCCTGCTTCCACAGTGTGG
CTTTTGCACACTTCCTCTGTCTTCCTGAAACTACTTCAGTAAGCCATGCCGTTCCTTCTC
TCTTCCCTGTTTTTATTTGGTGTTGTGGGTAGAAGCCCCAGACCTAACCATGGAAGCTAA
GTTCGGCCCACCTTGCTCTTCAGTCTTCTCCACACTGTGGGCAGAAGCGCCGTCCTTGCT
ACTTCATCTCACCCAGGTCCCATTCCAGGCAGCCAGGGCCTGGGTTTGAATTCTAGCGGG
GACAGCCTGCCATCATCCTTTCCACTCACCCTCTCCCGTTCAGCAGTCAGCCAGGTTAAG
GGGTTTGGTCCCTAGTGGTTACAGCCCTCAAGGAAATGAAATCTGAATTAACTCTACATG
ACTGTCCTTGATACACATTCTGCTGTTCTCACCTTTTCGAATGTAGTAGGGGGACAGGTC
ATGATGTTTGAAGAGAAGAAGCATTTTGCACATACACGTGTTGTACAACAGTAAACTCCT
CCGTTGTAACCAGCCGTCACGTCTCCATCTCCATCTCTTCCCGTTCTGTAGCCCCGGCTC
CACCAGCTGTTCCCCCTTGGCGTTGCCGAGCTTCCCCACGCGGTTAGCTACTGACTCTTT
CCACTCTGCGCCTTTCCTCCCTTCCCCTCACAACTGATCAAGTGAAGACTTGGTTATTAT
TTCTTCCTTTATGTGCTTTATTTTTTTTGTTTGGTTCTAATTAATAAAAATTAAAGTTTC
TAAATTTACATTTTTATAGGGTATTGTAAATAAAAACAAATTGTATACTTGAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCTGAGAAGTCCTTTATCTTTTCCCCCACTTGTATTTCCTTTTTTCTGTCCACCTCAGTG
GAAACAGCACACGGTTAAGCCTTTTCCTGCTACAACTACAGTGTACTTGAGCCTGTCCCC
TCAGGGACATGGAGGATTGCCAGAGATGATCCGAACTTAGAGCCTGCTTCCACAGTGTGG
CTTTTGCACACTTCCTCTGTCTTCCTGAAACTACTTCAGTAAGCCATGCCGTTCCTTCTC
TCTTCCCTGTTTTTATTTGGTGTTGTGGGTAGAAGCCCCAGACCTAACCATGGAAGCTAA
GTTCGGCCCACCTTGCTCTTCAGTCTTCTCCACACTGTGGGCAGAAGCGCCGTCCTTGCT
ACTTCATCTCACCCAGGTCCCATTCCAGGCAGCCAGGGCCTGGGTTTGAATTCTAGCGGG
GACAGCCTGCCATCATCCTTTCCACTCACCCTCTCCCGTTCAGCAGTCAGCCAGGTTAAG
GGGTTTGGTCCCTAGTGGTTACAGCCCTCAAGGAAATGAAATCTGAATTAACTCTACATG
ACTGTCCTTGATACACATTCTGCTGTTCTCACCTTTTCGAATGTAGTAGGGGGACAGGTC
ATGATGTTTGAAGAGAAGAAGCATTTTGCACATACACGTGTTGTACAACAGTAAACTCCT
CCGTTGTAACCAGCCGTCACGTCTCCATCTCCATCTCTTCCCGTTCTGTAGCCCCGGCTC
CACCAGCTGTTCCCCCTTGGCGTTGCCGAGCTTCCCCACGCGGTTAGCTACTGACTCTTT
CCACTCTGCGCCTTTCCTCCCTTCCCCTCACAACTGATCAAGTGAAGACTTGGTTATTAT
TTCTTCCTTTATGTGCTTTATTTTTTTTGTTTGGTTCTAATTAATAAAAATTAAAGTTTC
TAAATTTACATTTTTATAGGGTATTGTAAATAAAAACAAATTGTATACTTGAAAAAAAAA |
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1-380, gnl|bosTau2|chr15 (52883696-52883330) |
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1-380, gnl|Hg17|chr11 (59161729-59161356) |
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1-380, gnl|Mm7|chr19 (11624161-11624538) |
| |
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796-960, gnl|bosTau2|chr15 (52882934-52882777) |
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796-960, gnl|canFam2|chr18 (40198065-40197796) |
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796-960, gnl|dasNov1|scaffold_11432 (47586-47318) |
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796-960, gnl|echTel1|scaffold_311606 (41779-41534) |
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796-960, gnl|hg17|chr11 (59160744-59161020) |
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796-960, gnl|Hg17|chr11 (59160929-59160765) |
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796-960, gnl|loxAfr1|scaffold_35215 (27215-27467) |
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796-960, gnl|mm7|chr19 (11625111-11624859) |
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796-960, gnl|Mm7|chr19 (11624943-11625093) |
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796-960, gnl|monDom2|scaffold_33 (23997688-23997960) |
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796-960, gnl|oryCun1|scaffold_14848 (768-503) |
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796-960, gnl|panTro1|chr9 (60054798-60055074) |
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796-960, gnl|rheMac2|chr14 (14233758-14233487) |
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796-960, gnl|rn3|chr1 (214945770-214945513) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-380, gnl|bosTau2|chr15 (52883696-52883330) |
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1-380, gnl|Hg17|chr11 (59161729-59161356) |
|
1-380, gnl|Mm7|chr19 (11624161-11624538) |
| |
|
796-960, gnl|bosTau2|chr15 (52882934-52882777) |
|
796-960, gnl|canFam2|chr18 (40198065-40197796) |
|
796-960, gnl|dasNov1|scaffold_11432 (47586-47318) |
|
796-960, gnl|echTel1|scaffold_311606 (41779-41534) |
|
796-960, gnl|hg17|chr11 (59160744-59161020) |
|
796-960, gnl|Hg17|chr11 (59160929-59160765) |
|
796-960, gnl|loxAfr1|scaffold_35215 (27215-27467) |
|
796-960, gnl|mm7|chr19 (11625111-11624859) |
|
796-960, gnl|Mm7|chr19 (11624943-11625093) |
|
796-960, gnl|monDom2|scaffold_33 (23997688-23997960) |
|
796-960, gnl|oryCun1|scaffold_14848 (768-503) |
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796-960, gnl|panTro1|chr9 (60054798-60055074) |
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796-960, gnl|rheMac2|chr14 (14233758-14233487) |
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796-960, gnl|rn3|chr1 (214945770-214945513) |
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sin (0.349895) |
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cut (0.339847) |
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nje (0.33184) |
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pla (0.267344) |
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mgp (0.230681) |
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jca (0.22792) |
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eep (0.122564) |
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sin (0.349895) |
|
cut (0.339847) |
|
nje (0.33184) |
|
pla (0.267344) |
|
mgp (0.230681) |
|
jca (0.22792) |
|
eep (0.122564) |
