Ss1.1-Mixg-0010b12.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCATATTTGTTCAAAACAAGATTCCATCTCCAGCAAAATCAAGGAGTGCTGTGAAAAGAA GATACCACAGCGTGGCGAGTGCATAATTTACTCAAATAAAGATGACAGACCAAATGACTT GTCTCCAAGAGAAGCAAAGTTTACTGAAAGTGAAAATGTGTGTGAGGAACGAGATGCTGA CCCAGAGACCTTCCTGGCCGAGTTTCTTTATGAATACTCAAGGAGACATCCAGAACTATC CACACCAGAGCTATTAAGAATTGCTGGAGTATACGAAGATCTCCTGAGAGAGTGCTGCAA CTCGCAGACCCCTCCAGACTGTTACAAAGATGCAGAAAAGAAATTCAATGAGACAACTGA GAAAAGCCTCAAGATAGTACAACGGGAATGTGAACATTTTCAGAATTTGGGGAAGGATGA CTTGAAATACCACTACCTCGCCAGGCTCACAAAGATAGCCCCTCAGCTCTCCACGGACGA ACTGACTTTTCTCGGCAAGGAAATGATGATTGCTTTGGCCACCTGCTGTACACTGAGTGA AGAGTTTGCCTGCGTTGATAATTTGATGGATTTAGTTCTTGGAGAGCTATGTGGAATAAA TAAAAATCGAAGCATCAACCCCACTGTGGACCACTGCTGTAAAACAAACTTTGCCTTCAG AAGGTCCTGCTTTGAAGGCTTGGAAGCCGATAAGACATATGTGCCTCTACCTCCCTCTCA AGGATTATTTACCTTCCCCCCAGACTTGTGTCAGGCTCATAACGAGGAGCTCCAGAGAAA GAAAGACAGGTTTCTCGTCAACTTAGTGAAACTGAAGCCTGAACTAACAGAGGAGGCGCT CCGGTCATCACTGATCGAGTTCACTAATGTGGTGGTGAAGTGCTGCCAAGCCGAAGGGCC TGAAGCCTGCTTCGAGGAAGAGGGTCCAAAATTGGCAGCCAAAAGTCAGGCTGCTTGAAA AGCATCAAGTAAAACCCCCCAAAGGTTCCTGAGAAAAAAGAAGACCAACTTACCTGCTTC CTATTTGTCCTGTGGTGAATTTCATTTTCTGAGAAGAACACAGTAGAAAGATTCTTCTGT AAACTTCATCTGAAATCATGTTATCGCAGCAAGCAATAAACAACAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCATATTTGTTCAAAACAAGATTCCATCTCCAGCAAAATCAAGGAGTGCTGTGAAAAGAA GATACCACAGCGTGGCGAGTGCATAATTTACTCAAATAAAGATGACAGACCAAATGACTT GTCTCCAAGAGAAGCAAAGTTTACTGAAAGTGAAAATGTGTGTGAGGAACGAGATGCTGA CCCAGAGACCTTCCTGGCCGAGTTTCTTTATGAATACTCAAGGAGACATCCAGAACTATC CACACCAGAGCTATTAAGAATTGCTGGAGTATACGAAGATCTCCTGAGAGAGTGCTGCAA CTCGCAGACCCCTCCAGACTGTTACAAAGATGCAGAAAAGAAATTCAATGAGACAACTGA GAAAAGCCTCAAGATAGTACAACGGGAATGTGAACATTTTCAGAATTTGGGGAAGGATGA CTTGAAATACCACTACCTCGCCAGGCTCACAAAGATAGCCCCTCAGCTCTCCACGGACGA ACTGACTTTTCTCGGCAAGGAAATGATGATTGCTTTGGCCACCTGCTGTACACTGAGTGA AGAGTTTGCCTGCGTTGATAATTTGATGGATTTAGTTCTTGGAGAGCTATGTGGAATAAA TAAAAATCGAAGCATCAACCCCACTGTGGACCACTGCTGTAAAACAAACTTTGCCTTCAG AAGGTCCTGCTTTGAAGGCTTGGAAGCCGATAAGACATATGTGCCTCTACCTCCCTCTCA AGGATTATTTACCTTCCCCCCAGACTTGTGTCAGGCTCATAACGAGGAGCTCCAGAGAAA GAAAGACAGGTTTCTCGTCAACTTAGTGAAACTGAAGCCTGAACTAACAGAGGAGGCGCT CCGGTCATCACTGATCGAGTTCACTAATGTGGTGGTGAAGTGCTGCCAAGCCGAAGGGCC TGAAGCCTGCTTCGAGGAAGAGGGTCCAAAATTGGCAGCCAAAAGTCAGGCTGCTTGAAA AGCATCAAGTAAAACCCCCCAAAGGTTCCTGAGAAAAAAGAAGACCAACTTACCTGCTTC CTATTTGTCCTGTGGTGAATTTCATTTTCTGAGAAGAACACAGTAGAAAGATTCTTCTGT AAACTTCATCTGAAATCATGTTATCGCAGCAAGCAATAAACAACAGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 1-203, gnl|bosTau2|chr28 (25486292-25486090) | |
| 1-203, gnl|canFam2|chr13 (65161304-65161438) | |
| 1-203, gnl|dasNov1|scaffold_174023 (8-142) | |
| 1-203, gnl|echTel1|scaffold_260220 (3158-3024) | |
| 1-203, gnl|hg17|chr4 (74722632-74722766) | |
| 1-203, gnl|Hg17|chr4 (74722638-74722840) | |
| 1-203, gnl|loxAfr1|scaffold_8318 (58648-58517) | |
| 1-203, gnl|mm7|chr5 (90502774-90502908) | |
| 1-203, gnl|Mm7|chr5 (90502780-90502982) | |
| 1-203, gnl|monDom2|scaffold_32 (18590427-18590561) | |
| 1-203, gnl|oryCun1|scaffold_211509 (43584-43718) | |
| 1-203, gnl|panTro1|chr3 (58989241-58989107) | |
| 1-203, gnl|rheMac2|chr5 (56229123-56228989) | |
| 1-203, gnl|rn3|chr14 (19060839-19060705) | |
| 335-435, gnl|bosTau2|chr28 (25480419-25480319) | |
| 335-435, gnl|canFam2|chr13 (65167730-65167816) | |
| 335-435, gnl|dasNov1|scaffold_14912 (46276-46362) | |
| 335-435, gnl|echTel1|scaffold_313896 (45614-45700) | |
| 335-435, gnl|hg17|chr4 (74728391-74728477) | |
| 335-435, gnl|Hg17|chr4 (74728404-74728504) | |
| 335-435, gnl|loxAfr1|scaffold_8318 (52063-51977) | |
| 335-435, gnl|mm7|chr5 (90519088-90519174) | |
| 335-435, gnl|Mm7|chr5 (90519101-90519201) | |
| 335-435, gnl|monDom2|scaffold_32 (18595104-18595189) | |
| 335-435, gnl|oryCun1|scaffold_211509 (49162-49248) | |
| 335-435, gnl|panTro1|chr3 (58983482-58983396) | |
| 335-435, gnl|rheMac2|chr5 (56182890-56182804) | |
| 335-435, gnl|rn3|chr14 (19054855-19054769) | |
| 567-791, gnl|bosTau2|chr28 (25478140-25477916) | |
| 567-791, gnl|canFam2|chr13 (65169741-65169940) | |
| 567-791, gnl|echTel1|scaffold_313896 (47930-48128) | |
| 567-791, gnl|hg17|chr4 (74730721-74730920) | |
| 567-791, gnl|Hg17|chr4 (74730757-74730981) | |
| 567-791, gnl|loxAfr1|scaffold_8318 (49029-48830) | |
| 567-791, gnl|mm7|chr5 (90521402-90521601) | |
| 567-791, gnl|Mm7|chr5 (90521438-90521662) | |
| 567-791, gnl|monDom2|scaffold_32 (18597531-18597731) | |
| 567-791, gnl|oryCun1|scaffold_211509 (50989-51188) | |
| 567-791, gnl|panTro1|chr3 (58981155-58980956) | |
| 567-791, gnl|rheMac2|chr5 (56180564-56180365) | |
| 567-791, gnl|rn3|chr14 (19052444-19052245) | |
| 983-1128, gnl|bosTau2|chr28 (25475285-25475137) | |
| 983-1128, gnl|Mm7|chr5 (90524675-90524807) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-203, gnl|bosTau2|chr28 (25486292-25486090) | |
| 1-203, gnl|canFam2|chr13 (65161304-65161438) | |
| 1-203, gnl|dasNov1|scaffold_174023 (8-142) | |
| 1-203, gnl|echTel1|scaffold_260220 (3158-3024) | |
| 1-203, gnl|hg17|chr4 (74722632-74722766) | |
| 1-203, gnl|Hg17|chr4 (74722638-74722840) | |
| 1-203, gnl|loxAfr1|scaffold_8318 (58648-58517) | |
| 1-203, gnl|mm7|chr5 (90502774-90502908) | |
| 1-203, gnl|Mm7|chr5 (90502780-90502982) | |
| 1-203, gnl|monDom2|scaffold_32 (18590427-18590561) | |
| 1-203, gnl|oryCun1|scaffold_211509 (43584-43718) | |
| 1-203, gnl|panTro1|chr3 (58989241-58989107) | |
| 1-203, gnl|rheMac2|chr5 (56229123-56228989) | |
| 1-203, gnl|rn3|chr14 (19060839-19060705) | |
| 335-435, gnl|bosTau2|chr28 (25480419-25480319) | |
| 335-435, gnl|canFam2|chr13 (65167730-65167816) | |
| 335-435, gnl|dasNov1|scaffold_14912 (46276-46362) | |
| 335-435, gnl|echTel1|scaffold_313896 (45614-45700) | |
| 335-435, gnl|hg17|chr4 (74728391-74728477) | |
| 335-435, gnl|Hg17|chr4 (74728404-74728504) | |
| 335-435, gnl|loxAfr1|scaffold_8318 (52063-51977) | |
| 335-435, gnl|mm7|chr5 (90519088-90519174) | |
| 335-435, gnl|Mm7|chr5 (90519101-90519201) | |
| 335-435, gnl|monDom2|scaffold_32 (18595104-18595189) | |
| 335-435, gnl|oryCun1|scaffold_211509 (49162-49248) | |
| 335-435, gnl|panTro1|chr3 (58983482-58983396) | |
| 335-435, gnl|rheMac2|chr5 (56182890-56182804) | |
| 335-435, gnl|rn3|chr14 (19054855-19054769) | |
| 567-791, gnl|bosTau2|chr28 (25478140-25477916) | |
| 567-791, gnl|canFam2|chr13 (65169741-65169940) | |
| 567-791, gnl|echTel1|scaffold_313896 (47930-48128) | |
| 567-791, gnl|hg17|chr4 (74730721-74730920) | |
| 567-791, gnl|Hg17|chr4 (74730757-74730981) | |
| 567-791, gnl|loxAfr1|scaffold_8318 (49029-48830) | |
| 567-791, gnl|mm7|chr5 (90521402-90521601) | |
| 567-791, gnl|Mm7|chr5 (90521438-90521662) | |
| 567-791, gnl|monDom2|scaffold_32 (18597531-18597731) | |
| 567-791, gnl|oryCun1|scaffold_211509 (50989-51188) | |
| 567-791, gnl|panTro1|chr3 (58981155-58980956) | |
| 567-791, gnl|rheMac2|chr5 (56180564-56180365) | |
| 567-791, gnl|rn3|chr14 (19052444-19052245) | |
| 983-1128, gnl|bosTau2|chr28 (25475285-25475137) | |
| 983-1128, gnl|Mm7|chr5 (90524675-90524807) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) |