Ss1.1-Mixg-0011b07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGAATGGCTCAACAAGTTCAACACCTTCGCCGAGCCGGGGCCCATCACCAACCACACCT TCCTCTGCTCCCACGGAGGCATCCCGCCCAACAAATACCACTACATCGACGACCTGGTGG TGATCCTGCCCCAAAACGTCTGGGAGCATCTGTACAACAGGTTTGGGGGCGGCCCTGCCG TGAACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCGCTGGCCAAGCGCA GGCGGATCGAGATTGACACCTTCATCAAGCTGAACAAGGCGTTCCAGGCCGAGGAGTCGC CCAGCGTCATCTACTGCATCAGCATGCAGTGGTTCCGGGAGTGGGAGGCCTTTGTCAAGG GGAAGGACAACGAGCCCCCCGGGCCCATTGACAACAGCAGGATCGCCCAGGTCAAAGGCA GCGGCCACATCCAGCTGAAGCAGGGAGCTGACTACGGGCAGATCTCAGAGGAGACCTGGG TGTACCTGCTCAGCCTGTACGGCGGCGGCCCCGAGATCGCCATCCGCCAGAGCGTGGCCC AGCTCCAGGACCCGGAGAGCCTACACGGGGAGCAGAAAATCGAAGCTGAGACGCGGGCCG TGTGACCTGCTGGGCCAGCCTGCCCCCACCTTTGCCCTCCTCCCTCCGGAGGGTGTGTCT GTACCCAGATGAGAGGCCGGCCGCCGGGAAACGCGGATGTAAAGAGGCAGAAAGTTGTTT TGGTTCACAGTGAGTAGCGCCGCAGCTCGGAAATACACCCACTTCAGGCTTGTTTAAACG ACCCAGGCTCCGCGACCGTCCCTCGGGTCCTTGTCTCGGCAGTGCCCTCTGTCACTGCCG TCCTCGTGTCCCCCAAACCTGCCGTCTCGCTAGCTCGGGCCCAGCTTCTGTCCCTGGAGC GCTCGGTCAGGGGCCGCGGCCTTGGGACGGAGGGTCGGGGTGGCGTAGCTGCCCCGCTGC CCAGGCGTCTCCCTGGGGTGCCTGGTCCGGCACCCAGCTCCCAGGTAGAGCCGGCGAGCA GGGTGCCGCGCGTTCTGCAGAGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGAATGGCTCAACAAGTTCAACACCTTCGCCGAGCCGGGGCCCATCACCAACCACACCT TCCTCTGCTCCCACGGAGGCATCCCGCCCAACAAATACCACTACATCGACGACCTGGTGG TGATCCTGCCCCAAAACGTCTGGGAGCATCTGTACAACAGGTTTGGGGGCGGCCCTGCCG TGAACCACCTGTACGTGTGCTCCATCTGCCAGGTGGAGATCGAGGCGCTGGCCAAGCGCA GGCGGATCGAGATTGACACCTTCATCAAGCTGAACAAGGCGTTCCAGGCCGAGGAGTCGC CCAGCGTCATCTACTGCATCAGCATGCAGTGGTTCCGGGAGTGGGAGGCCTTTGTCAAGG GGAAGGACAACGAGCCCCCCGGGCCCATTGACAACAGCAGGATCGCCCAGGTCAAAGGCA GCGGCCACATCCAGCTGAAGCAGGGAGCTGACTACGGGCAGATCTCAGAGGAGACCTGGG TGTACCTGCTCAGCCTGTACGGCGGCGGCCCCGAGATCGCCATCCGCCAGAGCGTGGCCC AGCTCCAGGACCCGGAGAGCCTACACGGGGAGCAGAAAATCGAAGCTGAGACGCGGGCCG TGTGACCTGCTGGGCCAGCCTGCCCCCACCTTTGCCCTCCTCCCTCCGGAGGGTGTGTCT GTACCCAGATGAGAGGCCGGCCGCCGGGAAACGCGGATGTAAAGAGGCAGAAAGTTGTTT TGGTTCACAGTGAGTAGCGCCGCAGCTCGGAAATACACCCACTTCAGGCTTGTTTAAACG ACCCAGGCTCCGCGACCGTCCCTCGGGTCCTTGTCTCGGCAGTGCCCTCTGTCACTGCCG TCCTCGTGTCCCCCAAACCTGCCGTCTCGCTAGCTCGGGCCCAGCTTCTGTCCCTGGAGC GCTCGGTCAGGGGCCGCGGCCTTGGGACGGAGGGTCGGGGTGGCGTAGCTGCCCCGCTGC CCAGGCGTCTCCCTGGGGTGCCTGGTCCGGCACCCAGCTCCCAGGTAGAGCCGGCGAGCA GGGTGCCGCGCGTTCTGCAGAGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 158-272, gnl|bosTau2|chr11 (80477935-80478049) | |
| 158-272, gnl|canFam2|chr9 (57314992-57314878) | |
| 158-272, gnl|danRer3|chr5 (29098238-29098352) | |
| 158-272, gnl|dasNov1|scaffold_1870 (72499-72613) | |
| 158-272, gnl|echTel1|scaffold_272791 (20390-20504) | |
| 158-272, gnl|fr1|chrUn (120335289-120335176) | |
| 158-272, gnl|galGal2|chr17 (5149586-5149472) | |
| 158-272, gnl|hg17|chr9 (129717961-129718075) | |
| 158-272, gnl|Hg17|chr9 (129717960-129718074) | |
| 158-272, gnl|loxAfr1|scaffold_3801 (66632-66746) | |
| 158-272, gnl|mm7|chr2 (31026024-31026138) | |
| 158-272, gnl|Mm7|chr2 (31026023-31026137) | |
| 158-272, gnl|monDom2|scaffold_51 (4912781-4912895) | |
| 158-272, gnl|panTro1|chr11 (114583300-114583414) | |
| 158-272, gnl|rheMac2|chr15 (8965627-8965513) | |
| 158-272, gnl|rn3|chr3 (9972632-9972746) | |
| 158-272, gnl|tetNig1|chr4 (3060460-3060347) | |
| 158-272, gnl|xenTro1|scaffold_82 (68769-68883) | |
| 606-1029, gnl|bosTau2|chr11 (80480966-80481360) | |
| 606-1029, gnl|Hg17|chr9 (129722266-129722693) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 158-272, gnl|bosTau2|chr11 (80477935-80478049) | |
| 158-272, gnl|canFam2|chr9 (57314992-57314878) | |
| 158-272, gnl|danRer3|chr5 (29098238-29098352) | |
| 158-272, gnl|dasNov1|scaffold_1870 (72499-72613) | |
| 158-272, gnl|echTel1|scaffold_272791 (20390-20504) | |
| 158-272, gnl|fr1|chrUn (120335289-120335176) | |
| 158-272, gnl|galGal2|chr17 (5149586-5149472) | |
| 158-272, gnl|hg17|chr9 (129717961-129718075) | |
| 158-272, gnl|Hg17|chr9 (129717960-129718074) | |
| 158-272, gnl|loxAfr1|scaffold_3801 (66632-66746) | |
| 158-272, gnl|mm7|chr2 (31026024-31026138) | |
| 158-272, gnl|Mm7|chr2 (31026023-31026137) | |
| 158-272, gnl|monDom2|scaffold_51 (4912781-4912895) | |
| 158-272, gnl|panTro1|chr11 (114583300-114583414) | |
| 158-272, gnl|rheMac2|chr15 (8965627-8965513) | |
| 158-272, gnl|rn3|chr3 (9972632-9972746) | |
| 158-272, gnl|tetNig1|chr4 (3060460-3060347) | |
| 158-272, gnl|xenTro1|scaffold_82 (68769-68883) | |
| 606-1029, gnl|bosTau2|chr11 (80480966-80481360) | |
| 606-1029, gnl|Hg17|chr9 (129722266-129722693) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.401016) |