Ss1.1-Mixg-0011d12.3
|
ACCCAGAAATAAATGCAAAGACTGCTTTCACCAACGCAACTCCAGACGGCTGTAATTCCT
GGGATCGTATATGAAAACATGATGGAGCAGATATTCATCCATAGGGCTGTCACTGTGTTT
CCCAATGCTGCAGTTCGTACATTACTGCTGATGTTGATGTTTCTCTTAGTTTTCTGGGTC
ATTTACTTCTCTTCAAAAGACCACACAAAGTTTTTTTCCAGTTTGAGAAAACCTATCTCT
CTGAATTATTGGAACATCTTCAGAAAGTCCTACTACCAGGAAGAACCACTGAATTCAGAA
ATTTCACCAATAGAGATGGAGTTGAGAATAGAGGGAATCAGGGAGAAATTAGACCAACTG
TTCCCACCCAGACCCTTCACCCACGTGACCTCCACCACCAGCGCCACACACAGCACAGCC
ACCATCCTCAACCCTAAGGACACATACTGCAAGGGGGATCAGCTGGACGTCCTGCTGGAG
GTGAGGGACCACTTGGGACGCAGGAAGCCATATGGCGGGGATTTCCTGAGGGCCAGGATG
TCCTCCCCAGCCCTGCAGGCAGGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACCCAGAAATAAATGCAAAGACTGCTTTCACCAACGCAACTCCAGACGGCTGTAATTCCT
GGGATCGTATATGAAAACATGATGGAGCAGATATTCATCCATAGGGCTGTCACTGTGTTT
CCCAATGCTGCAGTTCGTACATTACTGCTGATGTTGATGTTTCTCTTAGTTTTCTGGGTC
ATTTACTTCTCTTCAAAAGACCACACAAAGTTTTTTTCCAGTTTGAGAAAACCTATCTCT
CTGAATTATTGGAACATCTTCAGAAAGTCCTACTACCAGGAAGAACCACTGAATTCAGAA
ATTTCACCAATAGAGATGGAGTTGAGAATAGAGGGAATCAGGGAGAAATTAGACCAACTG
TTCCCACCCAGACCCTTCACCCACGTGACCTCCACCACCAGCGCCACACACAGCACAGCC
ACCATCCTCAACCCTAAGGACACATACTGCAAGGGGGATCAGCTGGACGTCCTGCTGGAG
GTGAGGGACCACTTGGGACGCAGGAAGCCATATGGCGGGGATTTCCTGAGGGCCAGGATG
TCCTCCCCAGCCCTGCAGGCAGGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
232-564, gnl|bosTau2|chr15 (11657114-11657446) |
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232-564, gnl|canFam2|chr5 (21845600-21845172) |
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232-564, gnl|dasNov1|scaffold_115557 (6153-6593) |
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232-564, gnl|echTel1|scaffold_276424 (42584-42144) |
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232-564, gnl|hg17|chr11 (113888829-113889270) |
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232-564, gnl|Hg17|chr11 (113889372-113889036) |
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232-564, gnl|loxAfr1|scaffold_15505 (58009-57569) |
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232-564, gnl|mm7|chr9 (48354154-48353714) |
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232-564, gnl|Mm7|chr9 (48353612-48353946) |
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232-564, gnl|monDom2|scaffold_2 (125888177-125888617) |
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232-564, gnl|oryCun1|scaffold_167562 (5963-6403) |
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232-564, gnl|panTro1|chr9 (115893141-115893582) |
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232-564, gnl|rheMac2|chr14 (112991031-112991474) |
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232-564, gnl|rn3|chr8 (51636964-51637404) |
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232-564, gnl|xenTro1|scaffold_742 (270994-270554) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
232-564, gnl|bosTau2|chr15 (11657114-11657446) |
|
232-564, gnl|canFam2|chr5 (21845600-21845172) |
|
232-564, gnl|dasNov1|scaffold_115557 (6153-6593) |
|
232-564, gnl|echTel1|scaffold_276424 (42584-42144) |
|
232-564, gnl|hg17|chr11 (113888829-113889270) |
|
232-564, gnl|Hg17|chr11 (113889372-113889036) |
|
232-564, gnl|loxAfr1|scaffold_15505 (58009-57569) |
|
232-564, gnl|mm7|chr9 (48354154-48353714) |
|
232-564, gnl|Mm7|chr9 (48353612-48353946) |
|
232-564, gnl|monDom2|scaffold_2 (125888177-125888617) |
|
232-564, gnl|oryCun1|scaffold_167562 (5963-6403) |
|
232-564, gnl|panTro1|chr9 (115893141-115893582) |
|
232-564, gnl|rheMac2|chr14 (112991031-112991474) |
|
232-564, gnl|rn3|chr8 (51636964-51637404) |
|
232-564, gnl|xenTro1|scaffold_742 (270994-270554) |
