Non-Coding RNA Search

Ss1.1-Mixg-0011f03.3

Sequence:


               
               GGACGAGGAGGACTGCCTGGGGGTGCAGAGGGAGGACCGCAGGGGCGGGGACGGGCAGAT
CAACGAGCAGGTGGAGAAGCTGCGGCGGCCTGAGGGCGCCAGCAACGAGAGCGAGCGGGA
CTAGGTGTCCAGGGCGCCGGCCGGGTGTGGGATGGGGCCTTGAGCTGGGCGGGGCCTGGG
GCGGGGCCTGGCCTTTCTGACAGCCTAACCCACCGTGGCCTGGGCCCTCACCTTCTCAGC
TCTGAACTCTCTGGGCAACTCTCTGGGCGTAGGCCCCCCCAGCCCCTCCTGGGCAGGTGT
CCTGTCCCCAGGGGCTCTGCTGAGCGTCTGCCAGCCCAACACCGTGCATGACAAGAGGTA
GTTTTATTACCTGACTCCTGACCCTCCGTGGAGGAGGAGCCGGTACCTGCGTCCGCGTCC
ATCCCTCTGCCCCGGGCTCCTTCACTGCTTCTCACCAGTGGCCAAGGGCGCCACGCTGTT
TCCAAAACTGCTGGCCGAGGGCCACCCAAGGCCCCCGGCCCAGCGCGGACCATGCCGCCC
TTGTGCGCCTGTGCAGCCCCGGCCCCGCAGTGCTCGGTCGTCCGCCCGCACGTGACAGCA
CACCGCACCTCTGACCGCTGGCTTGCTCAGCTTCCACCGGGGCGAGATGTGCTTCCACCC
CGGTGTGGGAGCCAGGCGTCAGGGCCTTCCTGTCTGCCCCCCACCCCCGCCCCCCAAACA
CGTGTTCTTTTGTGTGATCAGGTGTAGGTTTCAGAATATAAGATACGACTGTATATAATT
GTAATAAATACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACGAGGAGGACTGCCTGGGGGTGCAGAGGGAGGACCGCAGGGGCGGGGACGGGCAGAT
CAACGAGCAGGTGGAGAAGCTGCGGCGGCCTGAGGGCGCCAGCAACGAGAGCGAGCGGGA
CTAGGTGTCCAGGGCGCCGGCCGGGTGTGGGATGGGGCCTTGAGCTGGGCGGGGCCTGGG
GCGGGGCCTGGCCTTTCTGACAGCCTAACCCACCGTGGCCTGGGCCCTCACCTTCTCAGC
TCTGAACTCTCTGGGCAACTCTCTGGGCGTAGGCCCCCCCAGCCCCTCCTGGGCAGGTGT
CCTGTCCCCAGGGGCTCTGCTGAGCGTCTGCCAGCCCAACACCGTGCATGACAAGAGGTA
GTTTTATTACCTGACTCCTGACCCTCCGTGGAGGAGGAGCCGGTACCTGCGTCCGCGTCC
ATCCCTCTGCCCCGGGCTCCTTCACTGCTTCTCACCAGTGGCCAAGGGCGCCACGCTGTT
TCCAAAACTGCTGGCCGAGGGCCACCCAAGGCCCCCGGCCCAGCGCGGACCATGCCGCCC
TTGTGCGCCTGTGCAGCCCCGGCCCCGCAGTGCTCGGTCGTCCGCCCGCACGTGACAGCA
CACCGCACCTCTGACCGCTGGCTTGCTCAGCTTCCACCGGGGCGAGATGTGCTTCCACCC
CGGTGTGGGAGCCAGGCGTCAGGGCCTTCCTGTCTGCCCCCCACCCCCGCCCCCCAAACA
CGTGTTCTTTTGTGTGATCAGGTGTAGGTTTCAGAATATAAGATACGACTGTATATAATT
GTAATAAATACG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-792, gnl|bosTau2|chr16 (22636032-22635193)
               

               
               1-792, gnl|Hg17|chr1 (10624187-10625065)
               

               
               1-792, gnl|Mm7|chr4 (147951006-147950092)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-792, gnl|bosTau2|chr16 (22636032-22635193)
               

               
               1-792, gnl|Hg17|chr1 (10624187-10625065)
               

               
               1-792, gnl|Mm7|chr4 (147951006-147950092)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cli (0.152812)
               

               
               hlv (0.139256)
               

               
               cly (0.120642)
               

               
               ebs (0.118301)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.152812)
               

               
               hlv (0.139256)
               

               
               cly (0.120642)
               

               
               ebs (0.118301)

	1-792, gnl\|bosTau2\|chr16 (22636032-22635193)
	1-792, gnl\|Hg17\|chr1 (10624187-10625065)
	1-792, gnl\|Mm7\|chr4 (147951006-147950092)