Ss1.1-Mixn-0001a13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTCTCCAGCTTCCTCATTTTCCGAAAACTGATGCTGGAGAAGGAGCTGGCTATCATGT TGTGGCGCATTCGCTGGGAAGAGCTGCAGTTTGGCAATTCAGAGCGATATCATAAAGGTG CAGGCAGTCGCCTCACACTGTCGCTGGGAAATGTGGTTGCCATCAAACATGTGAATAAGA AGCGCATTGAGCTGACCCGGCAGGTTCTGTTTGAACTCAAACATATGAGAGATGTTCAGT TCAACCATCTCACTCGCTTCATTGGTGCCTGCATAGACCCTCCCAACATTTGCATCGTCA CTGAGTATTGTCCTCGTGGGAGTTTACAGGATATTCTGGAAAATGACAGCATCAACTTGG ACTGGATGTTTCGTTATTCACTCATTAATGACCTTGTTAAGGTTACAGACGCAGATCGGA TCCTGAGTTGCTGTGGCTGTGGCATAGGCCAGCAGGTATATACCTCCATATGCCGCGGAA GCGGAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAGGAAGAAAACAAAGCCA GAAGCCTAATCATTGCTGGGTTCACAAATTGGGAGATTCCCAAAGGTTCTGTTGATAACA AAAAGAATAAAAAGGAAGAGTTCACAGAGAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTCTCCAGCTTCCTCATTTTCCGAAAACTGATGCTGGAGAAGGAGCTGGCTATCATGT TGTGGCGCATTCGCTGGGAAGAGCTGCAGTTTGGCAATTCAGAGCGATATCATAAAGGTG CAGGCAGTCGCCTCACACTGTCGCTGGGAAATGTGGTTGCCATCAAACATGTGAATAAGA AGCGCATTGAGCTGACCCGGCAGGTTCTGTTTGAACTCAAACATATGAGAGATGTTCAGT TCAACCATCTCACTCGCTTCATTGGTGCCTGCATAGACCCTCCCAACATTTGCATCGTCA CTGAGTATTGTCCTCGTGGGAGTTTACAGGATATTCTGGAAAATGACAGCATCAACTTGG ACTGGATGTTTCGTTATTCACTCATTAATGACCTTGTTAAGGTTACAGACGCAGATCGGA TCCTGAGTTGCTGTGGCTGTGGCATAGGCCAGCAGGTATATACCTCCATATGCCGCGGAA GCGGAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAGGAAGAAAACAAAGCCA GAAGCCTAATCATTGCTGGGTTCACAAATTGGGAGATTCCCAAAGGTTCTGTTGATAACA AAAAGAATAAAAAGGAAGAGTTCACAGAGAAAAAAA |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 20-147, gnl|bosTau2|chr8 (28531798-28531925) | |
| 20-147, gnl|canFam2|chr11 (55360316-55360468) | |
| 20-147, gnl|danRer3|chr16 (30097223-30097081) | |
| 20-147, gnl|echTel1|scaffold_273792 (1626-1760) | |
| 20-147, gnl|fr1|chrUn (182474818-182474970) | |
| 20-147, gnl|hg17|chr9 (35791624-35791776) | |
| 20-147, gnl|Hg17|chr9 (35791634-35791761) | |
| 20-147, gnl|loxAfr1|scaffold_23847 (64667-64819) | |
| 20-147, gnl|mm7|chr4 (43656852-43657004) | |
| 20-147, gnl|Mm7|chr4 (43656862-43656989) | |
| 20-147, gnl|monDom2|scaffold_17 (45730053-45729911) | |
| 20-147, gnl|oryCun1|scaffold_184457 (13612-13460) | |
| 20-147, gnl|panTro1|chr11 (36351285-36351437) | |
| 20-147, gnl|rheMac2|chr15 (41721154-41721002) | |
| 20-147, gnl|rn3|chr5 (60120598-60120750) | |
| 20-147, gnl|tetNig1|chrUn_random (46990449-46990321) | |
| 20-147, gnl|xenTro1|scaffold_1357 (48242-48110) | |
| 225-330, gnl|bosTau2|chr8 (28532681-28532786) | |
| 225-330, gnl|canFam2|chr11 (55361201-55361338) | |
| 225-330, gnl|danRer3|chr16 (23708886-23708764) | |
| 225-330, gnl|dasNov1|scaffold_1119 (98854-98714) | |
| 225-330, gnl|echTel1|scaffold_273792 (3288-3406) | |
| 225-330, gnl|fr1|chrUn (182479209-182479329) | |
| 225-330, gnl|galGal2|chrUn (120250549-120250422) | |
| 225-330, gnl|hg17|chr9 (35792485-35792625) | |
| 225-330, gnl|Hg17|chr9 (35792500-35792605) | |
| 225-330, gnl|loxAfr1|scaffold_23847 (65536-65676) | |
| 225-330, gnl|mm7|chr4 (43657882-43658022) | |
| 225-330, gnl|Mm7|chr4 (43657897-43658002) | |
| 225-330, gnl|monDom2|scaffold_17 (45728943-45728802) | |
| 225-330, gnl|oryCun1|scaffold_184457 (12751-12611) | |
| 225-330, gnl|panTro1|chr11 (36352146-36352286) | |
| 225-330, gnl|rheMac2|chr15 (41720281-41720141) | |
| 225-330, gnl|rn3|chr5 (60121681-60121818) | |
| 225-330, gnl|tetNig1|chrUn_random (46989922-46989815) | |
| 225-330, gnl|xenTro1|scaffold_1357 (44734-44607) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-147, gnl|bosTau2|chr8 (28531798-28531925) | |
| 20-147, gnl|canFam2|chr11 (55360316-55360468) | |
| 20-147, gnl|danRer3|chr16 (30097223-30097081) | |
| 20-147, gnl|echTel1|scaffold_273792 (1626-1760) | |
| 20-147, gnl|fr1|chrUn (182474818-182474970) | |
| 20-147, gnl|hg17|chr9 (35791624-35791776) | |
| 20-147, gnl|Hg17|chr9 (35791634-35791761) | |
| 20-147, gnl|loxAfr1|scaffold_23847 (64667-64819) | |
| 20-147, gnl|mm7|chr4 (43656852-43657004) | |
| 20-147, gnl|Mm7|chr4 (43656862-43656989) | |
| 20-147, gnl|monDom2|scaffold_17 (45730053-45729911) | |
| 20-147, gnl|oryCun1|scaffold_184457 (13612-13460) | |
| 20-147, gnl|panTro1|chr11 (36351285-36351437) | |
| 20-147, gnl|rheMac2|chr15 (41721154-41721002) | |
| 20-147, gnl|rn3|chr5 (60120598-60120750) | |
| 20-147, gnl|tetNig1|chrUn_random (46990449-46990321) | |
| 20-147, gnl|xenTro1|scaffold_1357 (48242-48110) | |
| 225-330, gnl|bosTau2|chr8 (28532681-28532786) | |
| 225-330, gnl|canFam2|chr11 (55361201-55361338) | |
| 225-330, gnl|danRer3|chr16 (23708886-23708764) | |
| 225-330, gnl|dasNov1|scaffold_1119 (98854-98714) | |
| 225-330, gnl|echTel1|scaffold_273792 (3288-3406) | |
| 225-330, gnl|fr1|chrUn (182479209-182479329) | |
| 225-330, gnl|galGal2|chrUn (120250549-120250422) | |
| 225-330, gnl|hg17|chr9 (35792485-35792625) | |
| 225-330, gnl|Hg17|chr9 (35792500-35792605) | |
| 225-330, gnl|loxAfr1|scaffold_23847 (65536-65676) | |
| 225-330, gnl|mm7|chr4 (43657882-43658022) | |
| 225-330, gnl|Mm7|chr4 (43657897-43658002) | |
| 225-330, gnl|monDom2|scaffold_17 (45728943-45728802) | |
| 225-330, gnl|oryCun1|scaffold_184457 (12751-12611) | |
| 225-330, gnl|panTro1|chr11 (36352146-36352286) | |
| 225-330, gnl|rheMac2|chr15 (41720281-41720141) | |
| 225-330, gnl|rn3|chr5 (60121681-60121818) | |
| 225-330, gnl|tetNig1|chrUn_random (46989922-46989815) | |
| 225-330, gnl|xenTro1|scaffold_1357 (44734-44607) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) |