Ss1.1-Mixn-0001g09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGCTGCCCCCGCCTCCGCCCGCGGCGCCCTCGGCGTCCGAGCTGGACCTGGGCGAGCA GCGGGAGCGCTGGGAGACGTTCCAGAAGCGGCAGAGGCTCAGCTTCGAGGGCGCCGCCAA GCTGCTGCTGGACACCTACGAATACCAGGGCCTGGTGAAACACACAGGAGGCTGCCACTG CGGCGCGGTGCGCTTTGAAGTTTGGGCCTCGGCAGACCTGCACATCTTTGACTGCAACTG CAGCATCTGTAAGAAGAAGCAGAACAGACACTTCATTGTCCCCGCCTCTCGCTTCAAGCT CCTGAAGGGCGCGGAGAGCATCACCACGTACACCTTCAACACGCACAAGGCGCAGCACAC CTTCTGCAAGAGATGCGGCGTCCAGAGCTTCTACTCCCCCCGCTCCAACCCGGGGGGCTT CGGAATCGCCCCCCACTGCCTGGACGAGGGCACCGTGCGCAGCGTGGTGGTCGAGGAGTT CAACGGCAGCGACTGGGAGAAGGCCATGAGGGAGCACAAGACCATCAAGAGCCTGTCCAA GGAGTGAGCGCCCGCTGCCCGGCGGGGAGGCGGCCCGCGGCCCCCTCCTCCCTGCAGGTC CCTCCGGCCACAGTGTCTTCAGCGGCTCTGTCCTCCCGCAGCTCGGATTTGGATTTTGAC ATAGGCTAGTTGATACCCTTCTATCTCTTCCCGACTTTTGTGTGATCTTTTAGCAAAATA AATATTTTTAACATGAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGCTGCCCCCGCCTCCGCCCGCGGCGCCCTCGGCGTCCGAGCTGGACCTGGGCGAGCA GCGGGAGCGCTGGGAGACGTTCCAGAAGCGGCAGAGGCTCAGCTTCGAGGGCGCCGCCAA GCTGCTGCTGGACACCTACGAATACCAGGGCCTGGTGAAACACACAGGAGGCTGCCACTG CGGCGCGGTGCGCTTTGAAGTTTGGGCCTCGGCAGACCTGCACATCTTTGACTGCAACTG CAGCATCTGTAAGAAGAAGCAGAACAGACACTTCATTGTCCCCGCCTCTCGCTTCAAGCT CCTGAAGGGCGCGGAGAGCATCACCACGTACACCTTCAACACGCACAAGGCGCAGCACAC CTTCTGCAAGAGATGCGGCGTCCAGAGCTTCTACTCCCCCCGCTCCAACCCGGGGGGCTT CGGAATCGCCCCCCACTGCCTGGACGAGGGCACCGTGCGCAGCGTGGTGGTCGAGGAGTT CAACGGCAGCGACTGGGAGAAGGCCATGAGGGAGCACAAGACCATCAAGAGCCTGTCCAA GGAGTGAGCGCCCGCTGCCCGGCGGGGAGGCGGCCCGCGGCCCCCTCCTCCCTGCAGGTC CCTCCGGCCACAGTGTCTTCAGCGGCTCTGTCCTCCCGCAGCTCGGATTTGGATTTTGAC ATAGGCTAGTTGATACCCTTCTATCTCTTCCCGACTTTTGTGTGATCTTTTAGCAAAATA AATATTTTTAACATGAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 139-240, gnl|bosTau2|chr19 (23790445-23790546) | |
| 139-240, gnl|canFam2|chr5 (42571946-42571801) | |
| 139-240, gnl|danRer3|chr5 (49037129-49036994) | |
| 139-240, gnl|dasNov1|scaffold_130274 (2060-1918) | |
| 139-240, gnl|echTel1|scaffold_183155 (2036-1898) | |
| 139-240, gnl|fr1|chrUn (253506030-253506145) | |
| 139-240, gnl|hg17|chr17 (16193938-16194083) | |
| 139-240, gnl|Hg17|chr17 (16194068-16193967) | |
| 139-240, gnl|loxAfr1|scaffold_47519 (15657-15513) | |
| 139-240, gnl|mm7|chr11 (62617817-62617961) | |
| 139-240, gnl|Mm7|chr11 (62617946-62617845) | |
| 139-240, gnl|monDom2|scaffold_86 (5870628-5870765) | |
| 139-240, gnl|oryCun1|scaffold_211350 (381594-381741) | |
| 139-240, gnl|panTro1|chr19_random (5070722-5070868) | |
| 139-240, gnl|rheMac2|chr16 (16114881-16114734) | |
| 139-240, gnl|rn3|chr10 (48729244-48729388) | |
| 139-240, gnl|tetNig1|chr7 (2141761-2141871) | |
| 422-738, gnl|bosTau2|chr19 (23796159-23796465) | |
| 422-738, gnl|Hg17|chr17 (16186981-16186576) | |
| 422-738, gnl|Mm7|chr11 (62606854-62606514) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 139-240, gnl|bosTau2|chr19 (23790445-23790546) | |
| 139-240, gnl|canFam2|chr5 (42571946-42571801) | |
| 139-240, gnl|danRer3|chr5 (49037129-49036994) | |
| 139-240, gnl|dasNov1|scaffold_130274 (2060-1918) | |
| 139-240, gnl|echTel1|scaffold_183155 (2036-1898) | |
| 139-240, gnl|fr1|chrUn (253506030-253506145) | |
| 139-240, gnl|hg17|chr17 (16193938-16194083) | |
| 139-240, gnl|Hg17|chr17 (16194068-16193967) | |
| 139-240, gnl|loxAfr1|scaffold_47519 (15657-15513) | |
| 139-240, gnl|mm7|chr11 (62617817-62617961) | |
| 139-240, gnl|Mm7|chr11 (62617946-62617845) | |
| 139-240, gnl|monDom2|scaffold_86 (5870628-5870765) | |
| 139-240, gnl|oryCun1|scaffold_211350 (381594-381741) | |
| 139-240, gnl|panTro1|chr19_random (5070722-5070868) | |
| 139-240, gnl|rheMac2|chr16 (16114881-16114734) | |
| 139-240, gnl|rn3|chr10 (48729244-48729388) | |
| 139-240, gnl|tetNig1|chr7 (2141761-2141871) | |
| 422-738, gnl|bosTau2|chr19 (23796159-23796465) | |
| 422-738, gnl|Hg17|chr17 (16186981-16186576) | |
| 422-738, gnl|Mm7|chr11 (62606854-62606514) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fce (0.271592) | |
| fty (0.17584) | |
| fbs (0.175346) | |
| cov (0.132153) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| fty (0.17584) | |
| fbs (0.175346) | |
| cov (0.132153) |