Non-Coding RNA Search

Ss1.1-Mixn-0001h19.5

Sequence:


               
               GCGGAAGGGCTTTTTGGTGCTCTTTGTCAGAAACGTGCAGCAATAGGGGCTTCTTTAATT
CGATTCTTTGAGAGCCCTGGAACTTCGGAGTTAAACAGGGTGGACCTCTATGACTTGTTT
ATTCCTGGGTTTGTCTTATCATGGCTGAAAATGACATAGACAGAATCCAGACTGAGAAAC
TCCTAAAGAGAGTACAAGAGCTGGAGCAGGAGGTACAAAGACTTAAACAAGAACAGGCCA
ACAACAAGGACTCAAAAGTTAGAGAAAGTTCTTCAGGAGGTAGAAGAGCTAAGCGTGCCT
TTGATTTCAGTGCTCATGGTCGAAGACATGTAGCCCTAAAGATAGCCTACCTGGGCTGGG
GCTATCAGGGCTTTGCCAGTCAGGAAAACACAAGCAATACAATTGAAGAGAAACTGTTCG
AGGCTCTAACCAAGACTCGACTAGTAGAAAACAGACAGACATCCAACTATCACCGGTGTG
GGCGAACAGACAAAGGAGTCAGTGCCTTTGGACAGGTGATTTCTCTTGACCTACGTTCTC
ATTTTCTAAAGGATAAGGATTCAGAGGTTATTAATTTAAAAGATGAAGTCAATGATGCCA
CTAAAGAGATTCGTTATACCCACATTCTCAATCGAGTGCTTCCTCCAGACATCCGTGTAC
TGGCCTGGGCTCCAGTAGAACCTAGCTTCAGTGCTAGGTTCAGCTGTCTTGAGCGGACTT
ACCGCTATTTTTTCCTCATGCTGATTTAGACATTGTAACCATGAACTATGCAGCTCAGAA
GTATGTTGGCACACATGACTTTAGGACTTATGTNAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGAAGGGCTTTTTGGTGCTCTTTGTCAGAAACGTGCAGCAATAGGGGCTTCTTTAATT
CGATTCTTTGAGAGCCCTGGAACTTCGGAGTTAAACAGGGTGGACCTCTATGACTTGTTT
ATTCCTGGGTTTGTCTTATCATGGCTGAAAATGACATAGACAGAATCCAGACTGAGAAAC
TCCTAAAGAGAGTACAAGAGCTGGAGCAGGAGGTACAAAGACTTAAACAAGAACAGGCCA
ACAACAAGGACTCAAAAGTTAGAGAAAGTTCTTCAGGAGGTAGAAGAGCTAAGCGTGCCT
TTGATTTCAGTGCTCATGGTCGAAGACATGTAGCCCTAAAGATAGCCTACCTGGGCTGGG
GCTATCAGGGCTTTGCCAGTCAGGAAAACACAAGCAATACAATTGAAGAGAAACTGTTCG
AGGCTCTAACCAAGACTCGACTAGTAGAAAACAGACAGACATCCAACTATCACCGGTGTG
GGCGAACAGACAAAGGAGTCAGTGCCTTTGGACAGGTGATTTCTCTTGACCTACGTTCTC
ATTTTCTAAAGGATAAGGATTCAGAGGTTATTAATTTAAAAGATGAAGTCAATGATGCCA
CTAAAGAGATTCGTTATACCCACATTCTCAATCGAGTGCTTCCTCCAGACATCCGTGTAC
TGGCCTGGGCTCCAGTAGAACCTAGCTTCAGTGCTAGGTTCAGCTGTCTTGAGCGGACTT
ACCGCTATTTTTTCCTCATGCTGATTTAGACATTGTAACCATGAACTATGCAGCTCAGAA
GTATGTTGGCACACATGACTTTAGGACTTATGTNAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12847644|dbj|BAB27651.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12847644|dbj|BAB27651.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               97-517, gnl|bosTau2|chr29 (22146869-22147289)
               

               
               97-517, gnl|Hg17|chr11 (125271433-125271010)
               

               
               97-517, gnl|Mm7|chr9 (35459584-35460001)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               97-517, gnl|bosTau2|chr29 (22146869-22147289)
               

               
               97-517, gnl|Hg17|chr11 (125271433-125271010)
               

               
               97-517, gnl|Mm7|chr9 (35459584-35460001)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	97-517, gnl\|bosTau2\|chr29 (22146869-22147289)
	97-517, gnl\|Hg17\|chr11 (125271433-125271010)
	97-517, gnl\|Mm7\|chr9 (35459584-35460001)