Non-Coding RNA Search

Ss1.1-Mixn-0001j17.5

Sequence:


               
               GCACGACCAGCTCTTCCACCTCAACGCCCTGGAGTGGGCGGCCAGCTCCGTGGAGGTGAC
GGCTGTGGCCGCCAAGAACGTGGCCCTGCTGGCTTTCAACCGCTGGTACCAGGACCTGGA
CAAGATTGACCAAAAGGATCTGATGCACAAGGTGAAGACGGAGCTGTGAGGCCTGGGGGC
CCAGGGAGCGGCCGGCCGAGCTGAAGGAGGGGCCCCCCACCGCCACCGCACCCCCTCTGT
CCCCTCAGGCGGAGCGTCCTTCAGACCCCGGGGCTGCGGAGCGCCGGCGCCCTCCAGCAC
GGGTCCCGGAGGACCCCCCGCCTCTCCAGCGAAACCATCCTCCCGGGGGAGCCTCTCGAC
GGGAGAGGGGGGAAGGGAAGGACGTTCCCGCCCTCTATCCGCTTATTTATTTTTTTTAAG
AAGAAATAAAAACCCATCTCAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACGACCAGCTCTTCCACCTCAACGCCCTGGAGTGGGCGGCCAGCTCCGTGGAGGTGAC
GGCTGTGGCCGCCAAGAACGTGGCCCTGCTGGCTTTCAACCGCTGGTACCAGGACCTGGA
CAAGATTGACCAAAAGGATCTGATGCACAAGGTGAAGACGGAGCTGTGAGGCCTGGGGGC
CCAGGGAGCGGCCGGCCGAGCTGAAGGAGGGGCCCCCCACCGCCACCGCACCCCCTCTGT
CCCCTCAGGCGGAGCGTCCTTCAGACCCCGGGGCTGCGGAGCGCCGGCGCCCTCCAGCAC
GGGTCCCGGAGGACCCCCCGCCTCTCCAGCGAAACCATCCTCCCGGGGGAGCCTCTCGAC
GGGAGAGGGGGGAAGGGAAGGACGTTCCCGCCCTCTATCCGCTTATTTATTTTTTTTAAG
AAGAAATAAAAACCCATCTCAAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-444, gnl|bosTau2|chr7 (42184042-42183573)
               

               
               1-444, gnl|Hg17|chr5 (148728242-148728688)
               

               
               1-444, gnl|Mm7|chr18 (62086919-62086277)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-444, gnl|bosTau2|chr7 (42184042-42183573)
               

               
               1-444, gnl|Hg17|chr5 (148728242-148728688)
               

               
               1-444, gnl|Mm7|chr18 (62086919-62086277)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               amn (0.417711)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)

	1-444, gnl\|bosTau2\|chr7 (42184042-42183573)
	1-444, gnl\|Hg17\|chr5 (148728242-148728688)
	1-444, gnl\|Mm7\|chr18 (62086919-62086277)