Non-Coding RNA Search

Ss1.1-Mixn-0001k21.5

Sequence:


               
               CTCAACTGAATATTAAGTGCATCAACTTCTTTACTTTGACGTGTTCTGCGTCTACTGAGC
CATGAAGTAAAAACACTATATGTGGTTAAAAAAAAACAGAAAAAGGAAAAAGTGTGATAC
AAACTTACCATTTCAACTTAAAGTCCTGAAAACTAATTTGTTTTTTAATGCAGGCTGATT
AAGCTGTGACCTCATTTAATCTCCTTAAGAAAAATAAAATGGTTACATGCAAAGATTCTA
GAATAGGCTCTTAAAATACATCTTTTGCTTTCCTTTTGGCTTGAGTCCAATGCTAGAACT
AGGCATCGGGAACTAGTTTTGAGTTTTATAGCTGAATCTTGCATGGGTCCTCAAAATTAA
ATCAAGAATTAGCCTCAGTTGTTGCTTCTATTGAAGTTTTAGTGACCCAAGCTGGGTGTT
TGTGTCTTGGCTACTTGTTTAATAGCACCTAGATTCCATATGAAGCTTCCAGGTTTGATG
TTCATTAAGAGGGCTTTTTTTCCTCCCTTCCTTCTTTTTTGCTGTGTGTAACAATGGGTT
GAAAGAATTGGCATCTCCGTAGTTTTCAGTAATTGTAAAAGTGTATATATTACTTGCCTC
CCCAATTAGATATAGTCTAAAATGGTAAACACAGCTGTGATTTTTAGTTAAGTAAAAGGG
TTAATACGGTATAGATACCAAAAGCTTTATAGCGTCATTAAAAAGATAAGCCACTACCTG
GCTGTGGTTATATGTCATTTCCATCATGCTAACTAGATTAATGGATGTGCCGGTTTTAAA
ACTTCAGCCTTACACTTGAGAAGTTAAACTGTGGTTCAATATTTAAACTGCCAATGTTAT
GCATCTGATGTTCTGTGTGCCGAGTAAAGGTACTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAACTGAATATTAAGTGCATCAACTTCTTTACTTTGACGTGTTCTGCGTCTACTGAGC
CATGAAGTAAAAACACTATATGTGGTTAAAAAAAAACAGAAAAAGGAAAAAGTGTGATAC
AAACTTACCATTTCAACTTAAAGTCCTGAAAACTAATTTGTTTTTTAATGCAGGCTGATT
AAGCTGTGACCTCATTTAATCTCCTTAAGAAAAATAAAATGGTTACATGCAAAGATTCTA
GAATAGGCTCTTAAAATACATCTTTTGCTTTCCTTTTGGCTTGAGTCCAATGCTAGAACT
AGGCATCGGGAACTAGTTTTGAGTTTTATAGCTGAATCTTGCATGGGTCCTCAAAATTAA
ATCAAGAATTAGCCTCAGTTGTTGCTTCTATTGAAGTTTTAGTGACCCAAGCTGGGTGTT
TGTGTCTTGGCTACTTGTTTAATAGCACCTAGATTCCATATGAAGCTTCCAGGTTTGATG
TTCATTAAGAGGGCTTTTTTTCCTCCCTTCCTTCTTTTTTGCTGTGTGTAACAATGGGTT
GAAAGAATTGGCATCTCCGTAGTTTTCAGTAATTGTAAAAGTGTATATATTACTTGCCTC
CCCAATTAGATATAGTCTAAAATGGTAAACACAGCTGTGATTTTTAGTTAAGTAAAAGGG
TTAATACGGTATAGATACCAAAAGCTTTATAGCGTCATTAAAAAGATAAGCCACTACCTG
GCTGTGGTTATATGTCATTTCCATCATGCTAACTAGATTAATGGATGTGCCGGTTTTAAA
ACTTCAGCCTTACACTTGAGAAGTTAAACTGTGGTTCAATATTTAAACTGCCAATGTTAT
GCATCTGATGTTCTGTGTGCCGAGTAAAGGTACTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-876, gnl|bosTau2|chr27 (17709338-17710206)
               

               
               12-876, gnl|Hg17|chr8 (9673124-9673970)
               

               
               12-876, gnl|Mm7|chr8 (33591675-33590952)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-876, gnl|bosTau2|chr27 (17709338-17710206)
               

               
               12-876, gnl|Hg17|chr8 (9673124-9673970)
               

               
               12-876, gnl|Mm7|chr8 (33591675-33590952)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.136874)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)

	12-876, gnl\|bosTau2\|chr27 (17709338-17710206)
	12-876, gnl\|Hg17\|chr8 (9673124-9673970)
	12-876, gnl\|Mm7\|chr8 (33591675-33590952)