Ss1.1-Mixn-0001o17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCACTCCTTCACATGGTGGAGGGTGGCTGAGGATGTCAGGATGTGAGAACAGGCAGCCGA GGGCTGTGAGGCATCTGAGCTACACGAGGGGCGACTGAGCAGAAGTGTCTCTGCACCAAC CAAGCAGGGTTGTGTGTGCATGAGTTTCCGAACTACCTCTCCCCCAAGAATGTGAGGCAT CGTCCCCTGGGCTGCAGCAGAGTGGGGCGGAGGGCTCGTAAACCTTCCTAGGCCAAGGCA GGAAAACCAGGACCGAGAAGGGTGCCTTGCTGATTGTCACCCGCAGCCAGAAGCAGTCAG AACTAAGGTGTTTCCACTCTTCATCCCTCAACCGTGTGCAACAAACGTGACTGCACACTG GTACACAGGGGCTGTGGGCACGTGTGCTCCTCAGACCACCTCTAGTCTAGGTTGGACCTA AAAGTCTGTCCCATGCCTCTGAGTGAGGCAGGAAAGAACCCATGTGCATTTCAGGCTCCA GTGCAACAAACGGCCAGTTCCCAAGTCCACTCTGATTGGCAGATTGGGGTACCCTTTGGA TTTTTGGTTTGAAATGAACTAGTCCAGTGTTTGAAAACCTTGGGCTCTCAATGTGTAAAC TCCCTGGACACCAGACCCCCGAGTGGTTGACACTCCCAGCAGGGTGTGGTTTCTCCTTGC AGTGGGGCTTGGATGTTTCCCTCTGGTGCAAGGCCTCCAGACACTGACGGCCAGCCTGTA TCACGTGGTGTGTGTCACCTTCCCCCTCACCCATCCCCATTAAAGTGACTGGCCATGAGG AGCCCAGAGGGTGGCATTTTCATCTGTGCCTAGCTCAGCAGGCTTACATGGCCACATTGA CTTGACATAAAACTGTGTAAAATGTGGAAGACTCAGCATGTTGATCAAACAATAAACTGT CCTAATTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCACTCCTTCACATGGTGGAGGGTGGCTGAGGATGTCAGGATGTGAGAACAGGCAGCCGA GGGCTGTGAGGCATCTGAGCTACACGAGGGGCGACTGAGCAGAAGTGTCTCTGCACCAAC CAAGCAGGGTTGTGTGTGCATGAGTTTCCGAACTACCTCTCCCCCAAGAATGTGAGGCAT CGTCCCCTGGGCTGCAGCAGAGTGGGGCGGAGGGCTCGTAAACCTTCCTAGGCCAAGGCA GGAAAACCAGGACCGAGAAGGGTGCCTTGCTGATTGTCACCCGCAGCCAGAAGCAGTCAG AACTAAGGTGTTTCCACTCTTCATCCCTCAACCGTGTGCAACAAACGTGACTGCACACTG GTACACAGGGGCTGTGGGCACGTGTGCTCCTCAGACCACCTCTAGTCTAGGTTGGACCTA AAAGTCTGTCCCATGCCTCTGAGTGAGGCAGGAAAGAACCCATGTGCATTTCAGGCTCCA GTGCAACAAACGGCCAGTTCCCAAGTCCACTCTGATTGGCAGATTGGGGTACCCTTTGGA TTTTTGGTTTGAAATGAACTAGTCCAGTGTTTGAAAACCTTGGGCTCTCAATGTGTAAAC TCCCTGGACACCAGACCCCCGAGTGGTTGACACTCCCAGCAGGGTGTGGTTTCTCCTTGC AGTGGGGCTTGGATGTTTCCCTCTGGTGCAAGGCCTCCAGACACTGACGGCCAGCCTGTA TCACGTGGTGTGTGTCACCTTCCCCCTCACCCATCCCCATTAAAGTGACTGGCCATGAGG AGCCCAGAGGGTGGCATTTTCATCTGTGCCTAGCTCAGCAGGCTTACATGGCCACATTGA CTTGACATAAAACTGTGTAAAATGTGGAAGACTCAGCATGTTGATCAAACAATAAACTGT CCTAATTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-397, gnl|bosTau2|chr1 (88405771-88405381) | |
| 1-397, gnl|canFam2|chr23 (33768947-33769259) | |
| 1-397, gnl|dasNov1|scaffold_9629 (13927-13621) | |
| 1-397, gnl|hg17|chr3 (135026285-135026607) | |
| 1-397, gnl|Hg17|chr3 (135026757-135026336) | |
| 1-397, gnl|loxAfr1|scaffold_193959 (857-552) | |
| 1-397, gnl|mm7|chr9 (102898884-102898619) | |
| 1-397, gnl|Mm7|chr9 (102898495-102898869) | |
| 1-397, gnl|monDom2|scaffold_24 (27215160-27215578) | |
| 1-397, gnl|oryCun1|scaffold_152416 (4880-4576) | |
| 1-397, gnl|panTro1|chr2_random (12652757-12652433) | |
| 1-397, gnl|rheMac2|chr2 (153923928-153923621) | |
| 1-397, gnl|rn3|chr8 (108210976-108210740) | |
| 467-918, gnl|bosTau2|chr1 (88405366-88404904) | |
| 467-918, gnl|canFam2|chr23 (33768422-33768903) | |
| 467-918, gnl|dasNov1|scaffold_9629 (14454-13961) | |
| 467-918, gnl|hg17|chr3 (135025743-135026251) | |
| 467-918, gnl|Hg17|chr3 (135026272-135025777) | |
| 467-918, gnl|loxAfr1|scaffold_193959 (1406-892) | |
| 467-918, gnl|mm7|chr9 (102899418-102898916) | |
| 467-918, gnl|Mm7|chr9 (102898894-102899379) | |
| 467-918, gnl|monDom2|scaffold_24 (27214487-27215130) | |
| 467-918, gnl|oryCun1|scaffold_166965 (463-7) | |
| 467-918, gnl|panTro1|chr2_random (12653293-12652791) | |
| 467-918, gnl|rheMac2|chr2 (153924466-153923962) | |
| 467-918, gnl|rn3|chr8 (108211515-108211008) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-397, gnl|bosTau2|chr1 (88405771-88405381) | |
| 1-397, gnl|canFam2|chr23 (33768947-33769259) | |
| 1-397, gnl|dasNov1|scaffold_9629 (13927-13621) | |
| 1-397, gnl|hg17|chr3 (135026285-135026607) | |
| 1-397, gnl|Hg17|chr3 (135026757-135026336) | |
| 1-397, gnl|loxAfr1|scaffold_193959 (857-552) | |
| 1-397, gnl|mm7|chr9 (102898884-102898619) | |
| 1-397, gnl|Mm7|chr9 (102898495-102898869) | |
| 1-397, gnl|monDom2|scaffold_24 (27215160-27215578) | |
| 1-397, gnl|oryCun1|scaffold_152416 (4880-4576) | |
| 1-397, gnl|panTro1|chr2_random (12652757-12652433) | |
| 1-397, gnl|rheMac2|chr2 (153923928-153923621) | |
| 1-397, gnl|rn3|chr8 (108210976-108210740) | |
| 467-918, gnl|bosTau2|chr1 (88405366-88404904) | |
| 467-918, gnl|canFam2|chr23 (33768422-33768903) | |
| 467-918, gnl|dasNov1|scaffold_9629 (14454-13961) | |
| 467-918, gnl|hg17|chr3 (135025743-135026251) | |
| 467-918, gnl|Hg17|chr3 (135026272-135025777) | |
| 467-918, gnl|loxAfr1|scaffold_193959 (1406-892) | |
| 467-918, gnl|mm7|chr9 (102899418-102898916) | |
| 467-918, gnl|Mm7|chr9 (102898894-102899379) | |
| 467-918, gnl|monDom2|scaffold_24 (27214487-27215130) | |
| 467-918, gnl|oryCun1|scaffold_166965 (463-7) | |
| 467-918, gnl|panTro1|chr2_random (12653293-12652791) | |
| 467-918, gnl|rheMac2|chr2 (153924466-153923962) | |
| 467-918, gnl|rn3|chr8 (108211515-108211008) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fcc (1.38449) | |
| elu (0.385356) | |
| fhi (0.339155) | |
| ece (0.229305) | |
| eye (0.170503) | |
| lnt (0.142308) | |
| ebs (0.118301) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (1.38449) | |
| elu (0.385356) | |
| fhi (0.339155) | |
| ece (0.229305) | |
| eye (0.170503) | |
| lnt (0.142308) | |
| ebs (0.118301) |