Ss1.1-Mixn-0002b05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTAGCGACAGCAGCCAACAGAGCAATGAACAGATAGACCCAGAGCCAGAGGAAACCAAAG CAAAGAAAGAATCAAGTGTTCCCACATGCCAGGGGGAACTGAGGCATTGGAAGACTGGTC ACTACACTTTAATCCATGACAACACCAAGACTGAATTTGCCCTGGACCTCCTCCTCTACT GCGGCTGTGAAGGATGGGAGCCAGAATATGGTGGCTTTACCTCCTACATTGCCAAAGGTG AAGACGAAGAGCTACTGACAGTGAATCCAGAAAACAATTCTTTGGCCTTGGTCTACAGAG ACAGAGAAACTCTGAAATTTGTTAAGCATATTAACCACCGAAGCCTGGAACAAAAGAAAA CCTTCCCAAACAGAACAGGTTTCTGGAACTTTTCATTTGTCTACTACGAATGACAAGGCT GGGCAAGGCTGGAAAAAGGAGGCCCGCCCTCAGTACTGGGACGTCTGGAAGAGTTAGACA CCGAAGGAAGGACAGCTCCAAGGTGGCCTGTGCGACAGCGTTCTTAAACTGTGTGGTTAT CCTTTAAGCGGGCTCAGAGTGGTTGTCCTCAGTCTAGACCTTGAGCTTGAGGCTGGGAGC TTATCTCTTGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTAGCGACAGCAGCCAACAGAGCAATGAACAGATAGACCCAGAGCCAGAGGAAACCAAAG CAAAGAAAGAATCAAGTGTTCCCACATGCCAGGGGGAACTGAGGCATTGGAAGACTGGTC ACTACACTTTAATCCATGACAACACCAAGACTGAATTTGCCCTGGACCTCCTCCTCTACT GCGGCTGTGAAGGATGGGAGCCAGAATATGGTGGCTTTACCTCCTACATTGCCAAAGGTG AAGACGAAGAGCTACTGACAGTGAATCCAGAAAACAATTCTTTGGCCTTGGTCTACAGAG ACAGAGAAACTCTGAAATTTGTTAAGCATATTAACCACCGAAGCCTGGAACAAAAGAAAA CCTTCCCAAACAGAACAGGTTTCTGGAACTTTTCATTTGTCTACTACGAATGACAAGGCT GGGCAAGGCTGGAAAAAGGAGGCCCGCCCTCAGTACTGGGACGTCTGGAAGAGTTAGACA CCGAAGGAAGGACAGCTCCAAGGTGGCCTGTGCGACAGCGTTCTTAAACTGTGTGGTTAT CCTTTAAGCGGGCTCAGAGTGGTTGTCCTCAGTCTAGACCTTGAGCTTGAGGCTGGGAGC TTATCTCTTGAT |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 68-193, gnl|bosTau2|chr18 (23957482-23957607) | |
| 68-193, gnl|canFam2|chr2 (62595457-62595288) | |
| 68-193, gnl|canFam2|chr2 (62595299-62595430) | |
| 68-193, gnl|danRer3|chr19 (32389099-32388951) | |
| 68-193, gnl|danRer3|chr19 (32388953-32389073) | |
| 68-193, gnl|dasNov1|scaffold_5232 (41321-41152) | |
| 68-193, gnl|dasNov1|scaffold_5232 (41163-41293) | |
| 68-193, gnl|echTel1|scaffold_221784 (940-767) | |
| 68-193, gnl|echTel1|scaffold_221784 (791-908) | |
| 68-193, gnl|fr1|chrUn (298595635-298595821) | |
| 68-193, gnl|galGal2|chr11 (2045998-2045840) | |
| 68-193, gnl|hg17|chr13 (48682763-48682895) | |
| 68-193, gnl|hg17|chr16 (55066216-55066383) | |
| 68-193, gnl|Hg17|chr16 (55066239-55066364) | |
| 68-193, gnl|mm7|chr8 (92651983-92652153) | |
| 68-193, gnl|mm7|chr8 (92652142-92652011) | |
| 68-193, gnl|Mm7|chr8 (92652009-92652134) | |
| 68-193, gnl|monDom2|scaffold_0 (45405774-45405905) | |
| 68-193, gnl|monDom2|scaffold_35 (23101050-23101217) | |
| 68-193, gnl|oryCun1|scaffold_198557 (73095-72922) | |
| 68-193, gnl|oryCun1|scaffold_198557 (72942-73066) | |
| 68-193, gnl|panTro1|chr14_random (14746105-14746237) | |
| 68-193, gnl|panTro1|chr18 (49164205-49164372) | |
| 68-193, gnl|rheMac2|chr17 (28025627-28025759) | |
| 68-193, gnl|rheMac2|chr20 (54787536-54787708) | |
| 68-193, gnl|rn3|chr19 (11392831-11392661) | |
| 68-193, gnl|rn3|chr19 (11392672-11392802) | |
| 68-193, gnl|tetNig1|chr5 (5221550-5221728) | |
| 250-612, gnl|bosTau2|chr18 (23958569-23958932) | |
| 250-612, gnl|Hg17|chr16 (55067455-55067816) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 68-193, gnl|bosTau2|chr18 (23957482-23957607) | |
| 68-193, gnl|canFam2|chr2 (62595457-62595288) | |
| 68-193, gnl|canFam2|chr2 (62595299-62595430) | |
| 68-193, gnl|danRer3|chr19 (32389099-32388951) | |
| 68-193, gnl|danRer3|chr19 (32388953-32389073) | |
| 68-193, gnl|dasNov1|scaffold_5232 (41321-41152) | |
| 68-193, gnl|dasNov1|scaffold_5232 (41163-41293) | |
| 68-193, gnl|echTel1|scaffold_221784 (940-767) | |
| 68-193, gnl|echTel1|scaffold_221784 (791-908) | |
| 68-193, gnl|fr1|chrUn (298595635-298595821) | |
| 68-193, gnl|galGal2|chr11 (2045998-2045840) | |
| 68-193, gnl|hg17|chr13 (48682763-48682895) | |
| 68-193, gnl|hg17|chr16 (55066216-55066383) | |
| 68-193, gnl|Hg17|chr16 (55066239-55066364) | |
| 68-193, gnl|mm7|chr8 (92651983-92652153) | |
| 68-193, gnl|mm7|chr8 (92652142-92652011) | |
| 68-193, gnl|Mm7|chr8 (92652009-92652134) | |
| 68-193, gnl|monDom2|scaffold_0 (45405774-45405905) | |
| 68-193, gnl|monDom2|scaffold_35 (23101050-23101217) | |
| 68-193, gnl|oryCun1|scaffold_198557 (73095-72922) | |
| 68-193, gnl|oryCun1|scaffold_198557 (72942-73066) | |
| 68-193, gnl|panTro1|chr14_random (14746105-14746237) | |
| 68-193, gnl|panTro1|chr18 (49164205-49164372) | |
| 68-193, gnl|rheMac2|chr17 (28025627-28025759) | |
| 68-193, gnl|rheMac2|chr20 (54787536-54787708) | |
| 68-193, gnl|rn3|chr19 (11392831-11392661) | |
| 68-193, gnl|rn3|chr19 (11392672-11392802) | |
| 68-193, gnl|tetNig1|chr5 (5221550-5221728) | |
| 250-612, gnl|bosTau2|chr18 (23958569-23958932) | |
| 250-612, gnl|Hg17|chr16 (55067455-55067816) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.146735) | |
| hlv (0.139256) |