Non-Coding RNA Search

Ss1.1-Mixn-0003a16.5

Sequence:


               
               ATGTGCATGATAACCATTTTTGCGCCGTCAATGCCCGTTTCTNGGCCATCGTCACCGAGA
GCGCAGGAGGTGGCTCCTTNCTCGTCATCCCTCTGGAGCAGACGGGCAGGATTGAACCCA
ACTACCCCAAAGTCTGCGGTCACCAGGGCAACGTGCTGGACATCAAGTGGAACCCCTTTA
TCGACAACATCATTGCCTCATGCTCGGAGGACACGTCGGTGCGGATCTGGGAAATCCCCG
AGGGCGGGCTGAAGCGGAACATGACGGAAGCTCTCCTGGAGCTGCACGGGCACAGCCGGC
GTGTGGGGCTGGTGGAGTGGCACCCCACCACCAACAACATCCTGTTCAGTGCCGGCTATG
ACTACAAGGTCCTCATCTGGAACCTGGACGTGGGTGAGCCAGTGAAGATGATAGACTGCC
ACTCAGACGTGATTCTCTGCATGTCCTTCAACACCGACGGCAGCCTGCTCACCACCACCT
GCAAGGACAAGAAACTGCGCGTGATTGAGCCCCGCTCCGGCCGCGTTCTGCAGGAGGCCA
ACTGCAAAAACCACAGAGTGAACCGGGTGGTCTTCCTGGGAAACATGAAGCGGCTTCTCA
CAACGGGGGTCTCCAGGTGGAACACGAGACAGATTGCCCTCTGGGACCAGGAGGACCTGT
CCATGCCCTTGATCGAGGAAGAAATCGATGGGCTTTCTGGCCTCCTGTTCCCCTTCTACG
ATGCTGACACCCACATGCTCTACCTGGCTGGAAAGGGAGACGGAAACATCCGGTACTACG
AGATCAGCACTGAGAAGCCCTACCTGAGTTACCTCATGGAGTTCCGCTCCCCAGCCCCGC
AGAAAGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGTGTCTGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTGCATGATAACCATTTTTGCGCCGTCAATGCCCGTTTCTNGGCCATCGTCACCGAGA
GCGCAGGAGGTGGCTCCTTNCTCGTCATCCCTCTGGAGCAGACGGGCAGGATTGAACCCA
ACTACCCCAAAGTCTGCGGTCACCAGGGCAACGTGCTGGACATCAAGTGGAACCCCTTTA
TCGACAACATCATTGCCTCATGCTCGGAGGACACGTCGGTGCGGATCTGGGAAATCCCCG
AGGGCGGGCTGAAGCGGAACATGACGGAAGCTCTCCTGGAGCTGCACGGGCACAGCCGGC
GTGTGGGGCTGGTGGAGTGGCACCCCACCACCAACAACATCCTGTTCAGTGCCGGCTATG
ACTACAAGGTCCTCATCTGGAACCTGGACGTGGGTGAGCCAGTGAAGATGATAGACTGCC
ACTCAGACGTGATTCTCTGCATGTCCTTCAACACCGACGGCAGCCTGCTCACCACCACCT
GCAAGGACAAGAAACTGCGCGTGATTGAGCCCCGCTCCGGCCGCGTTCTGCAGGAGGCCA
ACTGCAAAAACCACAGAGTGAACCGGGTGGTCTTCCTGGGAAACATGAAGCGGCTTCTCA
CAACGGGGGTCTCCAGGTGGAACACGAGACAGATTGCCCTCTGGGACCAGGAGGACCTGT
CCATGCCCTTGATCGAGGAAGAAATCGATGGGCTTTCTGGCCTCCTGTTCCCCTTCTACG
ATGCTGACACCCACATGCTCTACCTGGCTGGAAAGGGAGACGGAAACATCCGGTACTACG
AGATCAGCACTGAGAAGCCCTACCTGAGTTACCTCATGGAGTTCCGCTCCCCAGCCCCGC
AGAAAGGCCTAGGGGTCATGCCCAAGCACGGGCTGGATGTGTCTGCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|54041070|sp|Q9UQ03|COR2B_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|54041070|sp|Q9UQ03|COR2B_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-101, gnl|bosTau2|chr10 (10336074-10336174)
               

               
               1-101, gnl|Hg17|chr15 (66724653-66724753)
               

               
               1-101, gnl|Mm7|chr9 (62516063-62515963)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-101, gnl|bosTau2|chr10 (10336074-10336174)
               

               
               1-101, gnl|Hg17|chr15 (66724653-66724753)
               

               
               1-101, gnl|Mm7|chr9 (62516063-62515963)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-101, gnl\|bosTau2\|chr10 (10336074-10336174)
	1-101, gnl\|Hg17\|chr15 (66724653-66724753)
	1-101, gnl\|Mm7\|chr9 (62516063-62515963)