Ss1.1-Mixn-0004c13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTAAGTAACCAAGTATCAAAGTAACAAAATTATAAAAGGGTCAGAAATCCAAAATAGTTT TTAAAGATTAGACACCATCCATTCTTTGCTGCTTTCTGATTACATACATGTGTTGTGGAT CTTCCTTGTGTTTTTAGAATTCCTTAAATGTTTTGCTTCCAAGACCTTGAGTTAACATGT TCTTGAAATCATATGGACCCATTTAGAATGTAGATGGAAAAATGTAATTAGAAATGGAGA TCTAAGTAAAGGAAACTTTAAAGTGTTGTGGATTTTTCCCTCTGAAATAATACTTTTATG GCTTAGTGTCTTGGAAGGAGACATTAAAAATAAAAAATTTTGTATTTGGCAGAATGAAGC CACTGTTGTTTAATATAGAAGCAATTTTTAATGAAGTTACTGAATTATTTAGTACTAATA TGGCATCCAAGTCATTTCTCTTTTCAACCATTATTAAAATAATTTGTATACATAATGTAA AAAATACCTTTTAGTTCCTACTGGCTAATATTTTTTTTAAAGAATACTACATTTGATTTC TAAACTTCTCAGTTTGTTTTCAGCACAAAGGGTAACCAATGCAATGTGGAAAATCATAGT CAAGTGTGATGTGTCTATAAAAATAATTGAGTTTTGCATGTAACAGACCCTTAGCATCAG TGAGCAGACATGAGAACAGTTTGTGATGTTAAGCTGGTAATGTTCTTATATATAACACCA ATATATATTTGGTATACAATTCTGCTTCACAAACATATCCATAAAATGTTTACATATGGC AGAATCAAAGTATATAAAAACATTTGCTGTGTAAAATGGCATCTTCTTATTAGTGAACAA ACAGCAATGATGAATGCATTTCTGGATGGCAAGTGCATATTGTCAAGAAGTCATATAATT GTAATAAATATATATCTACTTACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTAAGTAACCAAGTATCAAAGTAACAAAATTATAAAAGGGTCAGAAATCCAAAATAGTTT TTAAAGATTAGACACCATCCATTCTTTGCTGCTTTCTGATTACATACATGTGTTGTGGAT CTTCCTTGTGTTTTTAGAATTCCTTAAATGTTTTGCTTCCAAGACCTTGAGTTAACATGT TCTTGAAATCATATGGACCCATTTAGAATGTAGATGGAAAAATGTAATTAGAAATGGAGA TCTAAGTAAAGGAAACTTTAAAGTGTTGTGGATTTTTCCCTCTGAAATAATACTTTTATG GCTTAGTGTCTTGGAAGGAGACATTAAAAATAAAAAATTTTGTATTTGGCAGAATGAAGC CACTGTTGTTTAATATAGAAGCAATTTTTAATGAAGTTACTGAATTATTTAGTACTAATA TGGCATCCAAGTCATTTCTCTTTTCAACCATTATTAAAATAATTTGTATACATAATGTAA AAAATACCTTTTAGTTCCTACTGGCTAATATTTTTTTTAAAGAATACTACATTTGATTTC TAAACTTCTCAGTTTGTTTTCAGCACAAAGGGTAACCAATGCAATGTGGAAAATCATAGT CAAGTGTGATGTGTCTATAAAAATAATTGAGTTTTGCATGTAACAGACCCTTAGCATCAG TGAGCAGACATGAGAACAGTTTGTGATGTTAAGCTGGTAATGTTCTTATATATAACACCA ATATATATTTGGTATACAATTCTGCTTCACAAACATATCCATAAAATGTTTACATATGGC AGAATCAAAGTATATAAAAACATTTGCTGTGTAAAATGGCATCTTCTTATTAGTGAACAA ACAGCAATGATGAATGCATTTCTGGATGGCAAGTGCATATTGTCAAGAAGTCATATAATT GTAATAAATATATATCTACTTACT |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 15-186, gnl|bosTau2|chr17 (18576732-18576907) | |
| 15-186, gnl|canFam2|chr19 (16104559-16104254) | |
| 15-186, gnl|echTel1|scaffold_238730 (9018-9296) | |
| 15-186, gnl|hg17|chr4 (129117706-129118002) | |
| 15-186, gnl|Hg17|chr4 (129117844-129118018) | |
| 15-186, gnl|mm7|chr3 (40561599-40561857) | |
| 15-186, gnl|panTro1|chr3 (145968115-145968408) | |
| 15-186, gnl|rheMac2|chr5 (120156089-120156413) | |
| 15-186, gnl|rn3|chr2 (127705269-127705471) | |
| 192-477, gnl|bosTau2|chr17 (18576958-18577251) | |
| 192-477, gnl|Hg17|chr4 (129118024-129119019) | |
| 192-477, gnl|Mm7|chr3 (40561876-40562315) | |
| 703-861, gnl|bosTau2|chr17 (18577766-18577925) | |
| 703-861, gnl|canFam2|chr19 (16103696-16103596) | |
| 703-861, gnl|dasNov1|scaffold_16922 (771-674) | |
| 703-861, gnl|galGal2|chr4 (34805506-34805649) | |
| 703-861, gnl|hg17|chr4 (129119294-129119401) | |
| 703-861, gnl|mm7|chr3 (40562553-40562655) | |
| 703-861, gnl|panTro1|chr3 (145969714-145969821) | |
| 703-861, gnl|rheMac2|chr5 (120157706-120157813) | |
| 703-861, gnl|rn3|chr2 (127706159-127706267) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-186, gnl|bosTau2|chr17 (18576732-18576907) | |
| 15-186, gnl|canFam2|chr19 (16104559-16104254) | |
| 15-186, gnl|echTel1|scaffold_238730 (9018-9296) | |
| 15-186, gnl|hg17|chr4 (129117706-129118002) | |
| 15-186, gnl|Hg17|chr4 (129117844-129118018) | |
| 15-186, gnl|mm7|chr3 (40561599-40561857) | |
| 15-186, gnl|panTro1|chr3 (145968115-145968408) | |
| 15-186, gnl|rheMac2|chr5 (120156089-120156413) | |
| 15-186, gnl|rn3|chr2 (127705269-127705471) | |
| 192-477, gnl|bosTau2|chr17 (18576958-18577251) | |
| 192-477, gnl|Hg17|chr4 (129118024-129119019) | |
| 192-477, gnl|Mm7|chr3 (40561876-40562315) | |
| 703-861, gnl|bosTau2|chr17 (18577766-18577925) | |
| 703-861, gnl|canFam2|chr19 (16103696-16103596) | |
| 703-861, gnl|dasNov1|scaffold_16922 (771-674) | |
| 703-861, gnl|galGal2|chr4 (34805506-34805649) | |
| 703-861, gnl|hg17|chr4 (129119294-129119401) | |
| 703-861, gnl|mm7|chr3 (40562553-40562655) | |
| 703-861, gnl|panTro1|chr3 (145969714-145969821) | |
| 703-861, gnl|rheMac2|chr5 (120157706-120157813) | |
| 703-861, gnl|rn3|chr2 (127706159-127706267) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| sag (0.182715) | |
| fco (0.157208) | |
| hyp (0.142837) | |
| ret (0.128733) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sag (0.182715) | |
| fco (0.157208) | |
| hyp (0.142837) | |
| ret (0.128733) |