Ss1.1-Mixn-0004d10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAACCGAAGACAACAATTGTTGCTGATGCTGGAAGGACTGGTAGATGAACGGAGTCGA CTCAATGAAGCCCTACAAGCAGAGAGACAGCTCTATAGCAGTCTGGTGAAGTTCCATGCA CATCCAGAGAGCTCTGAGAGAGACCGAACTCTGCAGGTGGAACTAGAAGGGGCCCAGGTG TTACGCAGTCGGCTAGAAGAAGTCCTTGGAAGAAGCCTGGAGCGCTTAAGCAGGCTGGAG ACCCTGGCCGCCATTGGAGGTGCAGCTGCGGGGGACGACACGGAGGACGCGAGCACAGAG TTCACCGACAGTATTGAGGAGGAGGCTGCGCACAATAGCCACCAGCAGATCCCTCACCTC TCACTCCCTGATGGCATTGAAGATCTTTGGTATGAGAGAGTGATCTGCAGGTTGAGCAAG TGTCTGCTCTAAGGCAGAACAAGATTGGAACATCAGCAGATCACTGATGGTTACTGCTGC TGTGGGACAGCATTAACTTCAGAGTAAACAAACAGGAGATGCAGATAAGAAGAGAGCCAC CTTCCCGCAGATGTGGTCCAAAACATCCTGACTGTGTGGATTCTTCACTCCCATTCTCAG TTCCAGGGAAACTGCTCTATAAAGCCAGTTCTTCCTCACTCTTCTTTCCTATAGCCTAGT GTGAGGAAATGACCAGACCACATTTTGAAGTCAGTCCAACCCTGGAATGAACCCTTACAT TGGGGTGTTTATATTTCCCTTGCAATGTCTTCCCTGTTACTTGGCATAGGTAGGCAATAC TTAATAAATTAGACAAAGTGTATACTTGCTGGATGAAGAATATCTTGGGTAAGCACCATT TTTCTTTGTATCCCCTTTCCTTGAAAAATCAGTCTTCAGTTTGGGGAAGGAGGTTATGAA ATCATTGTCAATTTACTTCAACTTTTCTGAAGTTCGAGGGTGTGACCCTCCTGCTACCAA TTAAATAAAGCTTGTTTTGCCATAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAACCGAAGACAACAATTGTTGCTGATGCTGGAAGGACTGGTAGATGAACGGAGTCGA CTCAATGAAGCCCTACAAGCAGAGAGACAGCTCTATAGCAGTCTGGTGAAGTTCCATGCA CATCCAGAGAGCTCTGAGAGAGACCGAACTCTGCAGGTGGAACTAGAAGGGGCCCAGGTG TTACGCAGTCGGCTAGAAGAAGTCCTTGGAAGAAGCCTGGAGCGCTTAAGCAGGCTGGAG ACCCTGGCCGCCATTGGAGGTGCAGCTGCGGGGGACGACACGGAGGACGCGAGCACAGAG TTCACCGACAGTATTGAGGAGGAGGCTGCGCACAATAGCCACCAGCAGATCCCTCACCTC TCACTCCCTGATGGCATTGAAGATCTTTGGTATGAGAGAGTGATCTGCAGGTTGAGCAAG TGTCTGCTCTAAGGCAGAACAAGATTGGAACATCAGCAGATCACTGATGGTTACTGCTGC TGTGGGACAGCATTAACTTCAGAGTAAACAAACAGGAGATGCAGATAAGAAGAGAGCCAC CTTCCCGCAGATGTGGTCCAAAACATCCTGACTGTGTGGATTCTTCACTCCCATTCTCAG TTCCAGGGAAACTGCTCTATAAAGCCAGTTCTTCCTCACTCTTCTTTCCTATAGCCTAGT GTGAGGAAATGACCAGACCACATTTTGAAGTCAGTCCAACCCTGGAATGAACCCTTACAT TGGGGTGTTTATATTTCCCTTGCAATGTCTTCCCTGTTACTTGGCATAGGTAGGCAATAC TTAATAAATTAGACAAAGTGTATACTTGCTGGATGAAGAATATCTTGGGTAAGCACCATT TTTCTTTGTATCCCCTTTCCTTGAAAAATCAGTCTTCAGTTTGGGGAAGGAGGTTATGAA ATCATTGTCAATTTACTTCAACTTTTCTGAAGTTCGAGGGTGTGACCCTCCTGCTACCAA TTAAATAAAGCTTGTTTTGCCATAAAAAAAAAAAAA |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 130-262, gnl|bosTau2|chr3 (17994385-17994253) | |
| 130-262, gnl|canFam2|chr17 (60380229-60379747) | |
| 130-262, gnl|canFam2|chr17 (60380066-60379731) | |
| 130-262, gnl|canFam2|chr17 (60380133-60379731) | |
| 130-262, gnl|dasNov1|scaffold_234 (135844-136327) | |
| 130-262, gnl|dasNov1|scaffold_234 (136011-136331) | |
| 130-262, gnl|dasNov1|scaffold_234 (135944-136331) | |
| 130-262, gnl|echTel1|scaffold_323307 (146753-146254) | |
| 130-262, gnl|echTel1|scaffold_323307 (146588-146238) | |
| 130-262, gnl|echTel1|scaffold_323307 (146655-146238) | |
| 130-262, gnl|galGal2|chrUn (18433311-18433796) | |
| 130-262, gnl|galGal2|chrUn (18433468-18433812) | |
| 130-262, gnl|galGal2|chrUn (18433382-18433812) | |
| 130-262, gnl|hg17|chr1 (143737441-143737942) | |
| 130-262, gnl|hg17|chr1 (142391959-142392309) | |
| 130-262, gnl|Hg17|chr1 (142392250-142392118) | |
| 130-262, gnl|hg17|chr1_random (582674-583095) | |
| 130-262, gnl|loxAfr1|scaffold_3215 (68766-69261) | |
| 130-262, gnl|loxAfr1|scaffold_3215 (68929-69277) | |
| 130-262, gnl|loxAfr1|scaffold_3215 (68862-69277) | |
| 130-262, gnl|mm7|chr3 (97612301-97612780) | |
| 130-262, gnl|mm7|chr3 (97612454-97612794) | |
| 130-262, gnl|mm7|chr3 (97612390-97612794) | |
| 130-262, gnl|Mm7|chr3 (97612738-97612606) | |
| 130-262, gnl|monDom2|scaffold_44 (861594-861052) | |
| 130-262, gnl|monDom2|scaffold_44 (861429-861039) | |
| 130-262, gnl|monDom2|scaffold_44 (861499-861040) | |
| 130-262, gnl|panTro1|chr1 (113060925-113060419) | |
| 130-262, gnl|panTro1|chr1 (113060758-113060403) | |
| 130-262, gnl|panTro1|chr1 (113060829-113060403) | |
| 130-262, gnl|rheMac2|chr1 (126451678-126452179) | |
| 130-262, gnl|rheMac2|chr1 (127379183-127378833) | |
| 130-262, gnl|rheMac2|chr1 (123296211-123295790) | |
| 130-262, gnl|rn3|chr2 (192547829-192548304) | |
| 130-262, gnl|rn3|chr2 (192547979-192548316) | |
| 130-262, gnl|rn3|chr2 (192547917-192548316) | |
| 352-767, gnl|bosTau2|chr3 (17979624-17979228) | |
| 352-767, gnl|canFam2|chr17 (60392199-60392699) | |
| 352-767, gnl|echTel1|scaffold_323307 (157247-157784) | |
| 352-767, gnl|Hg17|chr1 (142380307-142379902) | |
| 352-767, gnl|hg17|chr1_random (530016-530510) | |
| 352-767, gnl|loxAfr1|scaffold_3215 (57325-56825) | |
| 352-767, gnl|Mm7|chr3 (97601026-97600647) | |
| 352-767, gnl|monDom2|scaffold_44 (876897-877366) | |
| 352-767, gnl|oryCun1|scaffold_213369 (188059-188549) | |
| 352-767, gnl|panTro1|chr1 (113072470-113072964) | |
| 352-767, gnl|rheMac2|chr1 (123307524-123308025) | |
| 352-767, gnl|rn3|chr2 (192536996-192536541) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 130-262, gnl|bosTau2|chr3 (17994385-17994253) | |
| 130-262, gnl|canFam2|chr17 (60380229-60379747) | |
| 130-262, gnl|canFam2|chr17 (60380066-60379731) | |
| 130-262, gnl|canFam2|chr17 (60380133-60379731) | |
| 130-262, gnl|dasNov1|scaffold_234 (135844-136327) | |
| 130-262, gnl|dasNov1|scaffold_234 (136011-136331) | |
| 130-262, gnl|dasNov1|scaffold_234 (135944-136331) | |
| 130-262, gnl|echTel1|scaffold_323307 (146753-146254) | |
| 130-262, gnl|echTel1|scaffold_323307 (146588-146238) | |
| 130-262, gnl|echTel1|scaffold_323307 (146655-146238) | |
| 130-262, gnl|galGal2|chrUn (18433311-18433796) | |
| 130-262, gnl|galGal2|chrUn (18433468-18433812) | |
| 130-262, gnl|galGal2|chrUn (18433382-18433812) | |
| 130-262, gnl|hg17|chr1 (143737441-143737942) | |
| 130-262, gnl|hg17|chr1 (142391959-142392309) | |
| 130-262, gnl|Hg17|chr1 (142392250-142392118) | |
| 130-262, gnl|hg17|chr1_random (582674-583095) | |
| 130-262, gnl|loxAfr1|scaffold_3215 (68766-69261) | |
| 130-262, gnl|loxAfr1|scaffold_3215 (68929-69277) | |
| 130-262, gnl|loxAfr1|scaffold_3215 (68862-69277) | |
| 130-262, gnl|mm7|chr3 (97612301-97612780) | |
| 130-262, gnl|mm7|chr3 (97612454-97612794) | |
| 130-262, gnl|mm7|chr3 (97612390-97612794) | |
| 130-262, gnl|Mm7|chr3 (97612738-97612606) | |
| 130-262, gnl|monDom2|scaffold_44 (861594-861052) | |
| 130-262, gnl|monDom2|scaffold_44 (861429-861039) | |
| 130-262, gnl|monDom2|scaffold_44 (861499-861040) | |
| 130-262, gnl|panTro1|chr1 (113060925-113060419) | |
| 130-262, gnl|panTro1|chr1 (113060758-113060403) | |
| 130-262, gnl|panTro1|chr1 (113060829-113060403) | |
| 130-262, gnl|rheMac2|chr1 (126451678-126452179) | |
| 130-262, gnl|rheMac2|chr1 (127379183-127378833) | |
| 130-262, gnl|rheMac2|chr1 (123296211-123295790) | |
| 130-262, gnl|rn3|chr2 (192547829-192548304) | |
| 130-262, gnl|rn3|chr2 (192547979-192548316) | |
| 130-262, gnl|rn3|chr2 (192547917-192548316) | |
| 352-767, gnl|bosTau2|chr3 (17979624-17979228) | |
| 352-767, gnl|canFam2|chr17 (60392199-60392699) | |
| 352-767, gnl|echTel1|scaffold_323307 (157247-157784) | |
| 352-767, gnl|Hg17|chr1 (142380307-142379902) | |
| 352-767, gnl|hg17|chr1_random (530016-530510) | |
| 352-767, gnl|loxAfr1|scaffold_3215 (57325-56825) | |
| 352-767, gnl|Mm7|chr3 (97601026-97600647) | |
| 352-767, gnl|monDom2|scaffold_44 (876897-877366) | |
| 352-767, gnl|oryCun1|scaffold_213369 (188059-188549) | |
| 352-767, gnl|panTro1|chr1 (113072470-113072964) | |
| 352-767, gnl|rheMac2|chr1 (123307524-123308025) | |
| 352-767, gnl|rn3|chr2 (192536996-192536541) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ste (0.135208) |