Non-Coding RNA Search

Ss1.1-Mixn-0004e21.5

Sequence:


               
               GCAGGCTGCCCTCTGCAAGCTCGGCAGAAAGTTCCCCTGGGAGAGAAAGTCAATACATGT
CCCGAATCTGGTGATTGTCTCAGGAACAACTCCTTTCATTCTCATCCCACGGGAGAGAAG
TCCTTTCGGTGTGACAGTTGTGGCAAGGGGTTCAGCAGCAGCACGGGGCTCATCATCCAC
TACAGGACGCACACGGGAGAGAAGCCTTACAAATGCGAGGAGTGTGGCACATGCTTTAGT
CAGAGTTCAAATTTTCAGTGCCACCAGAGAGTCCACACTGAAGAAAAACCCTACAGGTGC
GAGGAGTGTGGGAAGGGCTTCGGGTGGAGCGTTAACCTCCGTGTTCATCAGCGGGTCCAC
AGGGGAGAGAAACCCTACAGGTGTGAGGCATGCGGGAAGGGCTTCACGCAGGCCGCGCAT
TATCACATCCACCAGAGGGTCCACACGGGGGAGAAGCCCTACAAGTGCGATGTCTGCGGC
AAGGGCTTCAGTCACAATTCCCCCTTGATATGCCACCGGAGAGTCCACACTGGCGAGAAG
CCGTACAGGTGTGAGGCGTGTGGGAAAGGCTTCACCCGTAATACGGACCTTCACATCCAT
TTCCGAGTCCACACCGGGGAGAAACCCTACAAGTGCAAAGAGTGTGGGAAGGGCTTCAGT
CAAGCTTCAAATCTGCAGGTCCACCAGAAACGTCACACTGGGGAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGGCTGCCCTCTGCAAGCTCGGCAGAAAGTTCCCCTGGGAGAGAAAGTCAATACATGT
CCCGAATCTGGTGATTGTCTCAGGAACAACTCCTTTCATTCTCATCCCACGGGAGAGAAG
TCCTTTCGGTGTGACAGTTGTGGCAAGGGGTTCAGCAGCAGCACGGGGCTCATCATCCAC
TACAGGACGCACACGGGAGAGAAGCCTTACAAATGCGAGGAGTGTGGCACATGCTTTAGT
CAGAGTTCAAATTTTCAGTGCCACCAGAGAGTCCACACTGAAGAAAAACCCTACAGGTGC
GAGGAGTGTGGGAAGGGCTTCGGGTGGAGCGTTAACCTCCGTGTTCATCAGCGGGTCCAC
AGGGGAGAGAAACCCTACAGGTGTGAGGCATGCGGGAAGGGCTTCACGCAGGCCGCGCAT
TATCACATCCACCAGAGGGTCCACACGGGGGAGAAGCCCTACAAGTGCGATGTCTGCGGC
AAGGGCTTCAGTCACAATTCCCCCTTGATATGCCACCGGAGAGTCCACACTGGCGAGAAG
CCGTACAGGTGTGAGGCGTGTGGGAAAGGCTTCACCCGTAATACGGACCTTCACATCCAT
TTCCGAGTCCACACCGGGGAGAAACCCTACAAGTGCAAAGAGTGTGGGAAGGGCTTCAGT
CAAGCTTCAAATCTGCAGGTCCACCAGAAACGTCACACTGGGGAGAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61885781|ref|XP_602431.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61885781|ref|XP_602431.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               105-708, gnl|bosTau2|chr10 (8996772-8996169)
               

               
               105-708, gnl|Hg17|chr19 (42818577-42817890)
               

               
               105-708, gnl|Mm7|chr2 (127310203-127309672)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               105-708, gnl|bosTau2|chr10 (8996772-8996169)
               

               
               105-708, gnl|Hg17|chr19 (42818577-42817890)
               

               
               105-708, gnl|Mm7|chr2 (127310203-127309672)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	105-708, gnl\|bosTau2\|chr10 (8996772-8996169)
	105-708, gnl\|Hg17\|chr19 (42818577-42817890)
	105-708, gnl\|Mm7\|chr2 (127310203-127309672)