Non-Coding RNA Search

Ss1.1-Mixn-0004g21.5

Sequence:


               
               GCGGCCGCCCCAGCGCTTCCAGCTCGGCGGGGGCGGGGAGGGAAGCGGGCCGCGGGGAGG
GGTGAGCCGCGAGGTCGCAGGTCAGCCGCGGGGCATCACGGGAAGGCCGGCGGGGGTCGC
GCTCGGTGGCGCTGGTTGGACGCGCTCGCTGGGCCACCTGCGGCTGCAGCGCGGCCTCTG
GCGGAGGAATCTGGGCGAAGGCGGCGCGTGATTGGCCGCGTCTTGGTGCAGCTCCCAGCC
GTGGTGCTTCCGCGTGCTGGCGGCCAGGTGCGACCTCGGCAGCGGGCCGTGGGCTGGGCG
GCTGGGCAGTGTGGACTCCGCGAGGCCTCACTAGGTTTTGAGAATTTAGAAACCGGGGCT
CCCTCTTTCTTCGGGAAGGACGGCCTCTTGGACGCTTGGTTTGTCCCCGCCTTGACATCT
CGAGGCGCAACCGGGGAGCTATTGTTGTCTAGCGGAGAGGTTGTGCGTATGTCAGCAGCC
CTAGGGGCACCTTGGTCATCCAGAAACAAGGGACCGGAGAACCTTGGAAGGTTTTTGAAC
CTAGTAATGTAAGTTTTAAAATTTGAATATATTCCCTTACACAAGACTGTGTCATCCGGA
CCCACGCATAAACGGGATGGTGTTACCTGGTCGACGTGAAGTCTCTTACCCTTACTACAG
GGGTCAGGTAATTCTTTTAATTTGGCTGGTATTATCTAGCCTTACCCAAACCATTTATCC
TCAAAGGACGTGTGCTGGAATGAGATAATTTATAAGGATAGTATTAAAGTGTGTTCAAAG
ACCAAAATCCGAAGAGAAAAATGTGCAAGGCATGAATAGACATTTCACACCAAAGAACAG
CAATGATCCTTAAATATGAACGGTTGTTTGTCCTCGCGCGTAATGGAAATGCACATTGGA
ATTCTACGAATAAACCGTGCTCATAGGTCTTCATCTTTCCTCATGGATGACCGAAACAGC
CTCCCAGTTGGTTCCCCGCTGCCCACCAGAACCATCTTGGGCACAACAAGCTAGCCCTTT
TCTAACATAACTGAGTGAGGGCTTGTGTGCCCGCAGTGCAGAACGCCAAGCTCTGATAAC
AGGTGTCTGCAGCCAAGTAAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCCCCAGCGCTTCCAGCTCGGCGGGGGCGGGGAGGGAAGCGGGCCGCGGGGAGG
GGTGAGCCGCGAGGTCGCAGGTCAGCCGCGGGGCATCACGGGAAGGCCGGCGGGGGTCGC
GCTCGGTGGCGCTGGTTGGACGCGCTCGCTGGGCCACCTGCGGCTGCAGCGCGGCCTCTG
GCGGAGGAATCTGGGCGAAGGCGGCGCGTGATTGGCCGCGTCTTGGTGCAGCTCCCAGCC
GTGGTGCTTCCGCGTGCTGGCGGCCAGGTGCGACCTCGGCAGCGGGCCGTGGGCTGGGCG
GCTGGGCAGTGTGGACTCCGCGAGGCCTCACTAGGTTTTGAGAATTTAGAAACCGGGGCT
CCCTCTTTCTTCGGGAAGGACGGCCTCTTGGACGCTTGGTTTGTCCCCGCCTTGACATCT
CGAGGCGCAACCGGGGAGCTATTGTTGTCTAGCGGAGAGGTTGTGCGTATGTCAGCAGCC
CTAGGGGCACCTTGGTCATCCAGAAACAAGGGACCGGAGAACCTTGGAAGGTTTTTGAAC
CTAGTAATGTAAGTTTTAAAATTTGAATATATTCCCTTACACAAGACTGTGTCATCCGGA
CCCACGCATAAACGGGATGGTGTTACCTGGTCGACGTGAAGTCTCTTACCCTTACTACAG
GGGTCAGGTAATTCTTTTAATTTGGCTGGTATTATCTAGCCTTACCCAAACCATTTATCC
TCAAAGGACGTGTGCTGGAATGAGATAATTTATAAGGATAGTATTAAAGTGTGTTCAAAG
ACCAAAATCCGAAGAGAAAAATGTGCAAGGCATGAATAGACATTTCACACCAAAGAACAG
CAATGATCCTTAAATATGAACGGTTGTTTGTCCTCGCGCGTAATGGAAATGCACATTGGA
ATTCTACGAATAAACCGTGCTCATAGGTCTTCATCTTTCCTCATGGATGACCGAAACAGC
CTCCCAGTTGGTTCCCCGCTGCCCACCAGAACCATCTTGGGCACAACAAGCTAGCCCTTT
TCTAACATAACTGAGTGAGGGCTTGTGTGCCCGCAGTGCAGAACGCCAAGCTCTGATAAC
AGGTGTCTGCAGCCAAGTAAGTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               29-561, gnl|bosTau2|chr9 (59580818-59580289)
               

               
               29-561, gnl|Hg17|chr6 (160118578-160118099)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-561, gnl|bosTau2|chr9 (59580818-59580289)
               

               
               29-561, gnl|Hg17|chr6 (160118578-160118099)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fli (0.202881)
               

               
               med (0.116252)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               med (0.116252)
               

               
               spc (0.113366)

	29-561, gnl\|bosTau2\|chr9 (59580818-59580289)
	29-561, gnl\|Hg17\|chr6 (160118578-160118099)