Ss1.1-Mixn-0004h16.5
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AAAAGATAACTGGCCTCTATTTCTTAATAAAGAACAGTAGTAACATCATAATGCATCTTG
TTTACCGTCATCATGGTTTCTCTTTAATTATTCTTGTTTTCATGTTTTATTTTTAAGAGG
ACATACTTATAAAAAGAGTGCATATTTTATTATGACATTTCCTAATGAAACACTTTGATT
TAAAGATGTATTTTTAAAAATGTTTACATTGATGATTAGTAACATTATGGCATGAATTTT
CAGGAAATCAGATAAAATATTTTTGGGGGGAATTACCTGAACAAATAAAAGGTTTTTGAT
ATAACTTTAAATAATTGTACCACATGCTAATACTGAAGAGATGTGTGGACTTTTTTTGGA
GAAAAGTAGATGGTTTGTTGCCTGAGTCTGTTCTAGTAAAGTGAAGACTCAAGTCAGTTA
TTCGGGTACTTGAAACAAAATGAAATCTTTTATTTCAGTGGAATCACAGCAGAGGCATGA
AATACTGGACAGTTGCCTTAGGTCTTCACTCGACTCCTCAGGATAGACGTGAGGCTTTGG
TTGAGTCTATATTAATTAGCATTTCATTAGTACCTCACATGCTTTTGGTGTAGTTGAGAT
TGCTTTAAATTTTGTGTTGAAACAACAGAACATTTGCACTGTAGTAATATGAGCACTAAC
TCTGTATTGGACAGCAGTTAGGGAATTGTTTGAAAGAATGAATTCATTGTAGACATTTTG
AAAAGATCAAGTCCTTTGTGCTTCATGTTAGCCTAGTGTGCAATATGCACTTTGGCTTTA
CTTCCCGTTTTCCTGCTTTTGTTTTCCCTTTGACATGAAGCATCGCAAACTGAAAGATCA
AAGTTGAGATTATATCCCATTGATAGTAGCAGAGTTTTTTTCTGTGTACAATTATAGGAT
TTGTAATCTCAACTGGAATTTTTTAGGCAGTAAGCCAGTATGAAATGTTTTAGGACATAA
CAAAATATAAATAAAAGCTTAATGTTTGTAAAGATACCATTTTTAGTATTTCTTTTCCAC
GTGAAGAAATAGGGGCTGCTAAAAAAGCTGCAGTGTTTTTGGTTTATGTAAATATTTGTA
AATTGGTCAGTGCCTGTAAATTTAAATATAAATAATCTTAAAAACAGTTTTTAACTTTTT
CAGAAGGACTGTGTACAACTTCTTTTAGACCTGCTGTAGCACAGTTTGTACCTCTAATGT
ATTTGGGTTTTTTGCAGACCAATTCAGATGCTAAGACTTTTGCTTTGACTCGTAAAAGGT
GCATATTTTCATTTTTTTCTTTAAGTTTAAATTTTTGTATGACCAAATGGAATAAAGTTT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAGATAACTGGCCTCTATTTCTTAATAAAGAACAGTAGTAACATCATAATGCATCTTG
TTTACCGTCATCATGGTTTCTCTTTAATTATTCTTGTTTTCATGTTTTATTTTTAAGAGG
ACATACTTATAAAAAGAGTGCATATTTTATTATGACATTTCCTAATGAAACACTTTGATT
TAAAGATGTATTTTTAAAAATGTTTACATTGATGATTAGTAACATTATGGCATGAATTTT
CAGGAAATCAGATAAAATATTTTTGGGGGGAATTACCTGAACAAATAAAAGGTTTTTGAT
ATAACTTTAAATAATTGTACCACATGCTAATACTGAAGAGATGTGTGGACTTTTTTTGGA
GAAAAGTAGATGGTTTGTTGCCTGAGTCTGTTCTAGTAAAGTGAAGACTCAAGTCAGTTA
TTCGGGTACTTGAAACAAAATGAAATCTTTTATTTCAGTGGAATCACAGCAGAGGCATGA
AATACTGGACAGTTGCCTTAGGTCTTCACTCGACTCCTCAGGATAGACGTGAGGCTTTGG
TTGAGTCTATATTAATTAGCATTTCATTAGTACCTCACATGCTTTTGGTGTAGTTGAGAT
TGCTTTAAATTTTGTGTTGAAACAACAGAACATTTGCACTGTAGTAATATGAGCACTAAC
TCTGTATTGGACAGCAGTTAGGGAATTGTTTGAAAGAATGAATTCATTGTAGACATTTTG
AAAAGATCAAGTCCTTTGTGCTTCATGTTAGCCTAGTGTGCAATATGCACTTTGGCTTTA
CTTCCCGTTTTCCTGCTTTTGTTTTCCCTTTGACATGAAGCATCGCAAACTGAAAGATCA
AAGTTGAGATTATATCCCATTGATAGTAGCAGAGTTTTTTTCTGTGTACAATTATAGGAT
TTGTAATCTCAACTGGAATTTTTTAGGCAGTAAGCCAGTATGAAATGTTTTAGGACATAA
CAAAATATAAATAAAAGCTTAATGTTTGTAAAGATACCATTTTTAGTATTTCTTTTCCAC
GTGAAGAAATAGGGGCTGCTAAAAAAGCTGCAGTGTTTTTGGTTTATGTAAATATTTGTA
AATTGGTCAGTGCCTGTAAATTTAAATATAAATAATCTTAAAAACAGTTTTTAACTTTTT
CAGAAGGACTGTGTACAACTTCTTTTAGACCTGCTGTAGCACAGTTTGTACCTCTAATGT
ATTTGGGTTTTTTGCAGACCAATTCAGATGCTAAGACTTTTGCTTTGACTCGTAAAAGGT
GCATATTTTCATTTTTTTCTTTAAGTTTAAATTTTTGTATGACCAAATGGAATAAAGTTT |
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1-356, gnl|bosTau2|chr10 (4383639-4383989) |
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1-356, gnl|canFam2|chr3 (30157314-30156980) |
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1-356, gnl|dasNov1|scaffold_13278 (15450-15812) |
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1-356, gnl|echTel1|scaffold_309370 (49305-48950) |
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1-356, gnl|galGal2|chrZ (5403773-5403432) |
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1-356, gnl|hg17|chr5 (79016717-79017072) |
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1-356, gnl|Hg17|chr5 (79016844-79017205) |
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1-356, gnl|loxAfr1|scaffold_24508 (38369-38719) |
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1-356, gnl|mm7|chr13 (90210649-90210299) |
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1-356, gnl|Mm7|chr13 (90210520-90210172) |
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1-356, gnl|monDom2|scaffold_27 (36352209-36351818) |
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1-356, gnl|oryCun1|scaffold_197680 (11178-10827) |
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1-356, gnl|panTro1|chr4 (36168853-36168498) |
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1-356, gnl|rheMac2|chr6 (75907330-75907691) |
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1-356, gnl|rn3|chr2 (23340451-23340095) |
| |
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367-1320, gnl|bosTau2|chr10 (4384032-4384992) |
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367-1320, gnl|Hg17|chr5 (79017248-79018211) |
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367-1320, gnl|Mm7|chr13 (90210139-90209212) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-356, gnl|bosTau2|chr10 (4383639-4383989) |
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1-356, gnl|canFam2|chr3 (30157314-30156980) |
|
1-356, gnl|dasNov1|scaffold_13278 (15450-15812) |
|
1-356, gnl|echTel1|scaffold_309370 (49305-48950) |
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1-356, gnl|galGal2|chrZ (5403773-5403432) |
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1-356, gnl|hg17|chr5 (79016717-79017072) |
|
1-356, gnl|Hg17|chr5 (79016844-79017205) |
|
1-356, gnl|loxAfr1|scaffold_24508 (38369-38719) |
|
1-356, gnl|mm7|chr13 (90210649-90210299) |
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1-356, gnl|Mm7|chr13 (90210520-90210172) |
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1-356, gnl|monDom2|scaffold_27 (36352209-36351818) |
|
1-356, gnl|oryCun1|scaffold_197680 (11178-10827) |
|
1-356, gnl|panTro1|chr4 (36168853-36168498) |
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1-356, gnl|rheMac2|chr6 (75907330-75907691) |
|
1-356, gnl|rn3|chr2 (23340451-23340095) |
| |
|
367-1320, gnl|bosTau2|chr10 (4384032-4384992) |
|
367-1320, gnl|Hg17|chr5 (79017248-79018211) |
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367-1320, gnl|Mm7|chr13 (90210139-90209212) |
|
liv (0.438853) |
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amn (0.417711) |
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rec (0.346141) |
|
vin (0.332557) |
|
kid (0.259471) |
|
fty (0.17584) |
|
mga (0.160205) |
|
fco (0.157208) |
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tbr (0.154178) |
|
ski (0.146735) |
|
lnt (0.142308) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
tra (0.123092) |
|
liv (0.438853) |
|
amn (0.417711) |
|
rec (0.346141) |
|
vin (0.332557) |
|
kid (0.259471) |
|
fty (0.17584) |
|
mga (0.160205) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
ski (0.146735) |
|
lnt (0.142308) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
tra (0.123092) |
