Ss1.1-Mixn-0004p19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGAGAGCCCACTTCCTGCTGAAGATGATAACGCCATCCGAGAACATTTGTGCATTAGAG CTTACTTGGAAGCCCATGAAACCTTTAATGAGTGGTTTAAGCATATGAATTCAGCTCCAC AAAAACCTACTTTGATACCTCAAGCAACTTTTACTGAGAAAGTGGCTCATGAACACAAAG AAAAGAAATACGAAATGGATTACGGAATTTGGAAAGGGCACTTGGATGCCCTCACTGCTG ATGTGAAGGAGAAAATGTACAATGTCTTGTTGTTTGTTGATGGAGGGTGGATGGTAGATG TTAGAGAGGATGCTGAGGAAGACCATGAAAGAACACATCAAATGGTTTTACTGAGACAGC TTTGTCTGCCAATGTTGTGTTTTCTGCTCCACACCATATTGCATAGTACTGGTCAGTATC AGGAATGCCTGCAGTTAGCAGATATGGTGTCCTCTGAGCGCCACAAGCTGTATCTGGTAT TTTCTAAGGAAGAACTAAGGAAATTGCTTCAGAAGTTAAGAGAATCCTCTCTAATGCTCC TAGACCAGGGACTTGATCCTCTAGGATATGAAATTCAATCATAATTCATCCACTCTTTGT AATCGCAACAATTTCCATGATAAATGGAGTTTTTTTGTAAAATATACGTATTTGTAATTA CTGGTTTTTTTCTTTTGCATTATCATGGGGAAGATATTTGTGACATTTGAATTTTGTACT TTTAATAATATTATGTTGACACTTTAAAATTTTAATGTATTATATCATTATTTCCCTGTG TTTATTAATAAAATTACATAAAAATTAAAATTTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGAGAGCCCACTTCCTGCTGAAGATGATAACGCCATCCGAGAACATTTGTGCATTAGAG CTTACTTGGAAGCCCATGAAACCTTTAATGAGTGGTTTAAGCATATGAATTCAGCTCCAC AAAAACCTACTTTGATACCTCAAGCAACTTTTACTGAGAAAGTGGCTCATGAACACAAAG AAAAGAAATACGAAATGGATTACGGAATTTGGAAAGGGCACTTGGATGCCCTCACTGCTG ATGTGAAGGAGAAAATGTACAATGTCTTGTTGTTTGTTGATGGAGGGTGGATGGTAGATG TTAGAGAGGATGCTGAGGAAGACCATGAAAGAACACATCAAATGGTTTTACTGAGACAGC TTTGTCTGCCAATGTTGTGTTTTCTGCTCCACACCATATTGCATAGTACTGGTCAGTATC AGGAATGCCTGCAGTTAGCAGATATGGTGTCCTCTGAGCGCCACAAGCTGTATCTGGTAT TTTCTAAGGAAGAACTAAGGAAATTGCTTCAGAAGTTAAGAGAATCCTCTCTAATGCTCC TAGACCAGGGACTTGATCCTCTAGGATATGAAATTCAATCATAATTCATCCACTCTTTGT AATCGCAACAATTTCCATGATAAATGGAGTTTTTTTGTAAAATATACGTATTTGTAATTA CTGGTTTTTTTCTTTTGCATTATCATGGGGAAGATATTTGTGACATTTGAATTTTGTACT TTTAATAATATTATGTTGACACTTTAAAATTTTAATGTATTATATCATTATTTCCCTGTG TTTATTAATAAAATTACATAAAAATTAAAATTTCTG |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 68-194, gnl|bosTau2|chr5 (28495443-28495317) | |
| 68-194, gnl|canFam2|chr10 (13863746-13863914) | |
| 68-194, gnl|danRer3|chr4 (28213883-28214032) | |
| 68-194, gnl|dasNov1|scaffold_23696 (11014-10846) | |
| 68-194, gnl|fr1|chrUn (180196496-180196623) | |
| 68-194, gnl|galGal2|chr1 (32182094-32182244) | |
| 68-194, gnl|hg17|chr12 (67414716-67414886) | |
| 68-194, gnl|Hg17|chr12 (67414754-67414880) | |
| 68-194, gnl|loxAfr1|scaffold_18450 (48034-48202) | |
| 68-194, gnl|mm7|chr10 (117269436-117269263) | |
| 68-194, gnl|Mm7|chr10 (117269393-117269267) | |
| 68-194, gnl|monDom2|scaffold_169 (797942-797799) | |
| 68-194, gnl|panTro1|chr10 (68944424-68944594) | |
| 68-194, gnl|rheMac2|chr11 (65730739-65730908) | |
| 68-194, gnl|rn3|chr7 (57089562-57089404) | |
| 68-194, gnl|tetNig1|chrUn_random (30117445-30117599) | |
| 68-194, gnl|xenTro1|scaffold_405 (883834-883674) | |
| 307-484, gnl|bosTau2|chr5 (28489056-28488879) | |
| 307-484, gnl|Hg17|chr12 (67421858-67422035) | |
| 307-484, gnl|Mm7|chr10 (117262860-117262683) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 68-194, gnl|bosTau2|chr5 (28495443-28495317) | |
| 68-194, gnl|canFam2|chr10 (13863746-13863914) | |
| 68-194, gnl|danRer3|chr4 (28213883-28214032) | |
| 68-194, gnl|dasNov1|scaffold_23696 (11014-10846) | |
| 68-194, gnl|fr1|chrUn (180196496-180196623) | |
| 68-194, gnl|galGal2|chr1 (32182094-32182244) | |
| 68-194, gnl|hg17|chr12 (67414716-67414886) | |
| 68-194, gnl|Hg17|chr12 (67414754-67414880) | |
| 68-194, gnl|loxAfr1|scaffold_18450 (48034-48202) | |
| 68-194, gnl|mm7|chr10 (117269436-117269263) | |
| 68-194, gnl|Mm7|chr10 (117269393-117269267) | |
| 68-194, gnl|monDom2|scaffold_169 (797942-797799) | |
| 68-194, gnl|panTro1|chr10 (68944424-68944594) | |
| 68-194, gnl|rheMac2|chr11 (65730739-65730908) | |
| 68-194, gnl|rn3|chr7 (57089562-57089404) | |
| 68-194, gnl|tetNig1|chrUn_random (30117445-30117599) | |
| 68-194, gnl|xenTro1|scaffold_405 (883834-883674) | |
| 307-484, gnl|bosTau2|chr5 (28489056-28488879) | |
| 307-484, gnl|Hg17|chr12 (67421858-67422035) | |
| 307-484, gnl|Mm7|chr10 (117262860-117262683) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fty (0.17584) | |
| bfe (0.149858) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| ebs (0.118301) | |
| ecc (0.115035) | |
| spc (0.113366) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| bfe (0.149858) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| ebs (0.118301) | |
| ecc (0.115035) | |
| spc (0.113366) |