Non-Coding RNA Search

Ss1.1-Mixn-0005c03.5

Sequence:


               
               TATTTCTGCACATCTGTTCATTGATATTGTGGTTGAAGGCTGAAATGAAGTATATTATGA
AATTTTTTTTAAAAGAAAACTCATCAAATTCAGGGTATCACAAAACTTTATTATATTGCT
AGACTGCCCACTATTTATTATATGTTATAGATCTGAGAGAGAAACCAAATGTTTTATTTT
TAATGTAAAACATCAAATTTAATTTTATTAGCATATTTTAGCAACTTTGGAATAAATATG
GACTTTTACTTGATTTTGAAGTAATCCCGATTGGGGCCAGTGTAATGGATATCGTGAATG
CTAGAATATGGGCTTTGAACCTAATACAAATATATTAATAGAAATTGTGATTTTTTTAAA
TGCCACGTCAATTGATATTAGTGTATGAATTAATCATATTTTAAAACATATTATGTGGTT
AGAGAAATGAGCTTTTCTGCCATGAATGTTAAATTGCGACTCGGTGGAAATGGAGTCACC
CTTTCAAGAGTGCAGTATCTCATTGCCCTCCTGTTTCCAGAAGCCACGATTTTTCAATCC
CTACAAAGAAACAAAGCCTCTATGTTGAGATCTGTGTTTTTGGTTCTATTAATTTGAGAT
CATCCTAAATACTTTATACAATATTTTCACATATGCACAAATCTACCCATTAGTGCTTTT
TTGAGAGGGCTGGGGGTGGGGAAGTGCAAAATAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTCTGCACATCTGTTCATTGATATTGTGGTTGAAGGCTGAAATGAAGTATATTATGA
AATTTTTTTTAAAAGAAAACTCATCAAATTCAGGGTATCACAAAACTTTATTATATTGCT
AGACTGCCCACTATTTATTATATGTTATAGATCTGAGAGAGAAACCAAATGTTTTATTTT
TAATGTAAAACATCAAATTTAATTTTATTAGCATATTTTAGCAACTTTGGAATAAATATG
GACTTTTACTTGATTTTGAAGTAATCCCGATTGGGGCCAGTGTAATGGATATCGTGAATG
CTAGAATATGGGCTTTGAACCTAATACAAATATATTAATAGAAATTGTGATTTTTTTAAA
TGCCACGTCAATTGATATTAGTGTATGAATTAATCATATTTTAAAACATATTATGTGGTT
AGAGAAATGAGCTTTTCTGCCATGAATGTTAAATTGCGACTCGGTGGAAATGGAGTCACC
CTTTCAAGAGTGCAGTATCTCATTGCCCTCCTGTTTCCAGAAGCCACGATTTTTCAATCC
CTACAAAGAAACAAAGCCTCTATGTTGAGATCTGTGTTTTTGGTTCTATTAATTTGAGAT
CATCCTAAATACTTTATACAATATTTTCACATATGCACAAATCTACCCATTAGTGCTTTT
TTGAGAGGGCTGGGGGTGGGGAAGTGCAAAATAAAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-696, gnl|bosTau2|chr13 (8193226-8193913)
               

               
               1-696, gnl|Hg17|chr10 (8097885-8098582)
               

               
               1-696, gnl|Mm7|chr2 (9854426-9853728)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-696, gnl|bosTau2|chr13 (8193226-8193913)
               

               
               1-696, gnl|Hg17|chr10 (8097885-8098582)
               

               
               1-696, gnl|Mm7|chr2 (9854426-9853728)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               lin (0.145603)
               

               
               csk (0.140746)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               csk (0.140746)
               

               
               ebs (0.118301)

	1-696, gnl\|bosTau2\|chr13 (8193226-8193913)
	1-696, gnl\|Hg17\|chr10 (8097885-8098582)
	1-696, gnl\|Mm7\|chr2 (9854426-9853728)