Ss1.1-Mixn-0005e09.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
TCTCTGACTGCCTCCACACGTCACAAACATGATGCTGCCTTCCATGAGCCTCCCTAGCCT GTCCTGGATGCTGCTGTCCTGCCTGATGCTCCTGTCTCAGGTCCAAGGTGAAGATTCCCC AGCAGACACGCCCTCTGCACGGATCAGCTGTCCCAAAGGCTCCATGGCCTATGCTTCCTA CTGCTATGCCTTGTTTATAACACCCAAAACCTGGATGGGTGCAGACATGGCCTGCCAGAA GCGGCCCTCAGGACACCTCGCATCTGTGCTCAGTGGGGCTGAGGCATCCTTCGTGTCCTC CCTGATCAAGAACAATTTGAACGCCCTCTCAGACGTCTGGATTGGGCTCCACGACCCCAC CGAGGGCTTGGAACCAAATGCTGGTGGATGGGAGTGGAGTAGCTCTGATGTGCTCAATTA CGTTGCCTGGGAGAGAAACCCCTCCACCAGCTCATACCCTGGCTACTGTGGGAGCCTGTC AAGAAACACAGGATATCTGAAATGGAGAGATTATAACTGTTATGTGAACTTACCCTATGT CTGCAAATTCAAGGGCTAGATGAGATTGGAAGTCAGGGTCCTGAGTCTGGTGTGCAGCTC CTCATAGCCATGGAACCAAGACCCATCTCGGAAGGGGATTTTCATCCCATGTCCCCAACA TGACCACTTCCTTCAGACCTTCCCGCCTGTCAATCATATTTCAGCTCTGTGTGCATTTTC CATGACCTGAGGTCTCAAATAGAGTAATAAATATCTTATTCCATAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
TCTCTGACTGCCTCCACACGTCACAAACATGATGCTGCCTTCCATGAGCCTCCCTAGCCT GTCCTGGATGCTGCTGTCCTGCCTGATGCTCCTGTCTCAGGTCCAAGGTGAAGATTCCCC AGCAGACACGCCCTCTGCACGGATCAGCTGTCCCAAAGGCTCCATGGCCTATGCTTCCTA CTGCTATGCCTTGTTTATAACACCCAAAACCTGGATGGGTGCAGACATGGCCTGCCAGAA GCGGCCCTCAGGACACCTCGCATCTGTGCTCAGTGGGGCTGAGGCATCCTTCGTGTCCTC CCTGATCAAGAACAATTTGAACGCCCTCTCAGACGTCTGGATTGGGCTCCACGACCCCAC CGAGGGCTTGGAACCAAATGCTGGTGGATGGGAGTGGAGTAGCTCTGATGTGCTCAATTA CGTTGCCTGGGAGAGAAACCCCTCCACCAGCTCATACCCTGGCTACTGTGGGAGCCTGTC AAGAAACACAGGATATCTGAAATGGAGAGATTATAACTGTTATGTGAACTTACCCTATGT CTGCAAATTCAAGGGCTAGATGAGATTGGAAGTCAGGGTCCTGAGTCTGGTGTGCAGCTC CTCATAGCCATGGAACCAAGACCCATCTCGGAAGGGGATTTTCATCCCATGTCCCCAACA TGACCACTTCCTTCAGACCTTCCCGCCTGTCAATCATATTTCAGCTCTGTGTGCATTTTC CATGACCTGAGGTCTCAAATAGAGTAATAAATATCTTATTCCATAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 30 entry(ies) | More info |
Aligned organism(s): 30 entry(ies) | Help | Less info |
1-123, gnl|bosTau2|chr11 (36810687-36810566) | |
1-123, gnl|canFam2|chr17 (47897673-47897501) | |
1-123, gnl|dasNov1|scaffold_1008 (99572-99385) | |
1-123, gnl|echTel1|scaffold_307149 (8745-8925) | |
1-123, gnl|hg17|chr2 (79226316-79226500) | |
1-123, gnl|Hg17|chr2 (79298217-79298096) | |
1-123, gnl|loxAfr1|scaffold_1755 (77898-78082) | |
1-123, gnl|mm7|chr6 (78444315-78444145) | |
1-123, gnl|Mm7|chr6 (78486499-78486381) | |
1-123, gnl|oryCun1|scaffold_177493 (104002-103828) | |
1-123, gnl|panTro1|chr12 (82032853-82033037) | |
1-123, gnl|rheMac2|chr13 (79484731-79484917) | |
1-123, gnl|rn3|chr4 (112630976-112630808) | |
222-365, gnl|bosTau2|chr11 (36809706-36809563) | |
222-365, gnl|canFam2|chr17 (47898703-47898503) | |
222-365, gnl|dasNov1|scaffold_1008 (101378-101086) | |
222-365, gnl|echTel1|scaffold_307149 (7308-7605) | |
222-365, gnl|hg17|chr2 (79225096-79225386) | |
222-365, gnl|Hg17|chr2 (79297249-79297106) | |
222-365, gnl|loxAfr1|scaffold_1755 (76683-76976) | |
222-365, gnl|mm7|chr6 (78445407-78445131) | |
222-365, gnl|Mm7|chr6 (78485526-78485383) | |
222-365, gnl|monDom2|scaffold_61 (10329065-10328778) | |
222-365, gnl|oryCun1|scaffold_98604 (18248-18480) | |
222-365, gnl|panTro1|chr12 (82031634-82031924) | |
222-365, gnl|rheMac2|chr13 (79483527-79483817) | |
222-365, gnl|rn3|chr4 (112632533-112632249) | |
489-758, gnl|bosTau2|chr11 (36808551-36808265) | |
489-758, gnl|Hg17|chr2 (79296077-79295794) | |
489-758, gnl|Mm7|chr6 (78484463-78484191) |
Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
1-123, gnl|bosTau2|chr11 (36810687-36810566) | |
1-123, gnl|canFam2|chr17 (47897673-47897501) | |
1-123, gnl|dasNov1|scaffold_1008 (99572-99385) | |
1-123, gnl|echTel1|scaffold_307149 (8745-8925) | |
1-123, gnl|hg17|chr2 (79226316-79226500) | |
1-123, gnl|Hg17|chr2 (79298217-79298096) | |
1-123, gnl|loxAfr1|scaffold_1755 (77898-78082) | |
1-123, gnl|mm7|chr6 (78444315-78444145) | |
1-123, gnl|Mm7|chr6 (78486499-78486381) | |
1-123, gnl|oryCun1|scaffold_177493 (104002-103828) | |
1-123, gnl|panTro1|chr12 (82032853-82033037) | |
1-123, gnl|rheMac2|chr13 (79484731-79484917) | |
1-123, gnl|rn3|chr4 (112630976-112630808) | |
222-365, gnl|bosTau2|chr11 (36809706-36809563) | |
222-365, gnl|canFam2|chr17 (47898703-47898503) | |
222-365, gnl|dasNov1|scaffold_1008 (101378-101086) | |
222-365, gnl|echTel1|scaffold_307149 (7308-7605) | |
222-365, gnl|hg17|chr2 (79225096-79225386) | |
222-365, gnl|Hg17|chr2 (79297249-79297106) | |
222-365, gnl|loxAfr1|scaffold_1755 (76683-76976) | |
222-365, gnl|mm7|chr6 (78445407-78445131) | |
222-365, gnl|Mm7|chr6 (78485526-78485383) | |
222-365, gnl|monDom2|scaffold_61 (10329065-10328778) | |
222-365, gnl|oryCun1|scaffold_98604 (18248-18480) | |
222-365, gnl|panTro1|chr12 (82031634-82031924) | |
222-365, gnl|rheMac2|chr13 (79483527-79483817) | |
222-365, gnl|rn3|chr4 (112632533-112632249) | |
489-758, gnl|bosTau2|chr11 (36808551-36808265) | |
489-758, gnl|Hg17|chr2 (79296077-79295794) | |
489-758, gnl|Mm7|chr6 (78484463-78484191) |
Expressed library(ies): 7 entry(ies) | More info |
Expressed library(ies): 7 entry(ies) | Help | Less info |
duo (1.55521) | |
jej (0.791374) | |
nje (0.49776) | |
cje (0.495704) | |
ill (0.351185) | |
sin (0.349895) | |
fcc (0.197785) |
Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
duo (1.55521) | |
jej (0.791374) | |
nje (0.49776) | |
cje (0.495704) | |
ill (0.351185) | |
sin (0.349895) | |
fcc (0.197785) |