Ss1.1-Mixn-0005g23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGATCTTCTTCAGAAATAAGTTTTTGTTCACTAGCAGACTCAACTGGGTGATTGTTGA AGGCGAATGCCCAACCCTATCCTATGTAGTTACCAGACTCATCAAGAACAACGAATACAT ATTCCGAGTGCGGGCAGTAAACAAATACGGCCCTGGTGTGCCTGTTGAATCAGAGCCCAT TGTCGCCAGAAACTCGTTCACTATTCCATCACGACCTGGCATACCTGAAGAAGTTGGGGC TAGCAAAGAGCATATCATCATTCAGTGGACAAAACCTGAATCTGACGGTGGCAGTGATAT CAGCAACTACCTAGTAGACAAACGTGAGAAGAAGAGCTTGCGCTGGACACGTGTGAACAA AGACTATGTGGTGTATGATACCAGGCTGAAGGTGACTAACCTGATGGAAGGTTGTGCTTA CCAGTTCCGGGTGACCGCAGTAAATGCTGCTGGTAACAGTGAGCCCAGTGAAGCTTCCAA CTTCATCTCCTGCAGAGAACCATCATATACCCCTGGACCACCTTCTGCTCCGAGAGTCGT GGATACCACCAAACACAGCATTAGTTTAGCATGGACCAAGCCCATGTATGATGGTGGCAC TGACATCACAGGATATGTCCTCGAAATGCAAGAGAAGGACACTGATCAGTGGTACCGAGT GCACACTAATGCCACAATAAGGAATAATGAATTCACTGTGACAGACCTCAAAATGGGCCA GAAGTATTCCTTCAGAGTTGCTGCTGTGAACGTGAAGGGTATGAGTGAATACAGCGAGTC AACTGCCGAAATTGAGCCCGTGGAACGACTAGAAATACCAGATCTTGAGCTTGCAGATGA TTTAAAGAAGACTGTGACTGTCAGGGCTGGGGCCTCATTGCGGCTAATGGTATCTGTATC TGGAAGACCACCTCCCATCATCACATGGAGCAAGAAGGGCATTGACCTTGCAAGCCGGGC CATCATTGACAACACTGAGAGCTACTCGTTACTTATCGTGGACAAAGTCAACCGTTATGA TGCTGGAAAGTACACCATTGAAGCTGAAAATCAATCTGGCAAGAAATCAGCAACAGTCCT TGTGAAAGTATACGATACTCCTGGTCCCTGTCCTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGATCTTCTTCAGAAATAAGTTTTTGTTCACTAGCAGACTCAACTGGGTGATTGTTGA AGGCGAATGCCCAACCCTATCCTATGTAGTTACCAGACTCATCAAGAACAACGAATACAT ATTCCGAGTGCGGGCAGTAAACAAATACGGCCCTGGTGTGCCTGTTGAATCAGAGCCCAT TGTCGCCAGAAACTCGTTCACTATTCCATCACGACCTGGCATACCTGAAGAAGTTGGGGC TAGCAAAGAGCATATCATCATTCAGTGGACAAAACCTGAATCTGACGGTGGCAGTGATAT CAGCAACTACCTAGTAGACAAACGTGAGAAGAAGAGCTTGCGCTGGACACGTGTGAACAA AGACTATGTGGTGTATGATACCAGGCTGAAGGTGACTAACCTGATGGAAGGTTGTGCTTA CCAGTTCCGGGTGACCGCAGTAAATGCTGCTGGTAACAGTGAGCCCAGTGAAGCTTCCAA CTTCATCTCCTGCAGAGAACCATCATATACCCCTGGACCACCTTCTGCTCCGAGAGTCGT GGATACCACCAAACACAGCATTAGTTTAGCATGGACCAAGCCCATGTATGATGGTGGCAC TGACATCACAGGATATGTCCTCGAAATGCAAGAGAAGGACACTGATCAGTGGTACCGAGT GCACACTAATGCCACAATAAGGAATAATGAATTCACTGTGACAGACCTCAAAATGGGCCA GAAGTATTCCTTCAGAGTTGCTGCTGTGAACGTGAAGGGTATGAGTGAATACAGCGAGTC AACTGCCGAAATTGAGCCCGTGGAACGACTAGAAATACCAGATCTTGAGCTTGCAGATGA TTTAAAGAAGACTGTGACTGTCAGGGCTGGGGCCTCATTGCGGCTAATGGTATCTGTATC TGGAAGACCACCTCCCATCATCACATGGAGCAAGAAGGGCATTGACCTTGCAAGCCGGGC CATCATTGACAACACTGAGAGCTACTCGTTACTTATCGTGGACAAAGTCAACCGTTATGA TGCTGGAAAGTACACCATTGAAGCTGAAAATCAATCTGGCAAGAAATCAGCAACAGTCCT TGTGAAAGTATACGATACTCCTGGTCCCTGTCCTTC |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 32-200, gnl|bosTau2|chr2 (7858705-7858873) | |
| 32-200, gnl|canFam2|chr36 (25193918-25194271) | |
| 32-200, gnl|danRer3|chr9 (37654557-37654892) | |
| 32-200, gnl|dasNov1|scaffold_41173 (827-475) | |
| 32-200, gnl|echTel1|scaffold_317123 (349814-349457) | |
| 32-200, gnl|fr1|chrUn (199948160-199948501) | |
| 32-200, gnl|galGal2|chr7 (16167563-16167198) | |
| 32-200, gnl|hg17|chr2 (179236047-179236399) | |
| 32-200, gnl|Hg17|chr2 (179236222-179236054) | |
| 32-200, gnl|loxAfr1|scaffold_7218 (46609-46961) | |
| 32-200, gnl|mm7|chr2 (76566902-76567243) | |
| 32-200, gnl|Mm7|chr2 (76567077-76566909) | |
| 32-200, gnl|monDom2|scaffold_2 (79392137-79392489) | |
| 32-200, gnl|oryCun1|scaffold_206234 (506675-506320) | |
| 32-200, gnl|panTro1|chr13 (69021842-69022194) | |
| 32-200, gnl|rheMac2|chr12 (42196989-42197341) | |
| 32-200, gnl|rn3|chr3 (59320229-59320570) | |
| 32-200, gnl|tetNig1|chrUn_random (42031252-42030912) | |
| 32-200, gnl|xenTro1|scaffold_546 (323017-323387) | |
| 203-506, gnl|bosTau2|chr2 (7859012-7859315) | |
| 203-506, gnl|canFam2|chr36 (25193477-25193801) | |
| 203-506, gnl|danRer3|chr9 (37654121-37654433) | |
| 203-506, gnl|dasNov1|scaffold_41173 (1286-952) | |
| 203-506, gnl|echTel1|scaffold_317123 (350251-349927) | |
| 203-506, gnl|fr1|chrUn (199947693-199948094) | |
| 203-506, gnl|galGal2|chr7 (16167982-16167658) | |
| 203-506, gnl|hg17|chr2 (179235606-179235930) | |
| 203-506, gnl|Hg17|chr2 (179235925-179235622) | |
| 203-506, gnl|loxAfr1|scaffold_7218 (46142-46466) | |
| 203-506, gnl|mm7|chr2 (76566465-76566783) | |
| 203-506, gnl|Mm7|chr2 (76566778-76566475) | |
| 203-506, gnl|monDom2|scaffold_2 (79391673-79391997) | |
| 203-506, gnl|oryCun1|scaffold_206234 (507091-506769) | |
| 203-506, gnl|panTro1|chr13 (69021401-69021725) | |
| 203-506, gnl|rheMac2|chr12 (42196551-42196875) | |
| 203-506, gnl|rn3|chr3 (59319797-59320115) | |
| 203-506, gnl|tetNig1|chrUn_random (42031730-42031336) | |
| 203-506, gnl|xenTro1|scaffold_546 (322596-322923) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 32-200, gnl|bosTau2|chr2 (7858705-7858873) | |
| 32-200, gnl|canFam2|chr36 (25193918-25194271) | |
| 32-200, gnl|danRer3|chr9 (37654557-37654892) | |
| 32-200, gnl|dasNov1|scaffold_41173 (827-475) | |
| 32-200, gnl|echTel1|scaffold_317123 (349814-349457) | |
| 32-200, gnl|fr1|chrUn (199948160-199948501) | |
| 32-200, gnl|galGal2|chr7 (16167563-16167198) | |
| 32-200, gnl|hg17|chr2 (179236047-179236399) | |
| 32-200, gnl|Hg17|chr2 (179236222-179236054) | |
| 32-200, gnl|loxAfr1|scaffold_7218 (46609-46961) | |
| 32-200, gnl|mm7|chr2 (76566902-76567243) | |
| 32-200, gnl|Mm7|chr2 (76567077-76566909) | |
| 32-200, gnl|monDom2|scaffold_2 (79392137-79392489) | |
| 32-200, gnl|oryCun1|scaffold_206234 (506675-506320) | |
| 32-200, gnl|panTro1|chr13 (69021842-69022194) | |
| 32-200, gnl|rheMac2|chr12 (42196989-42197341) | |
| 32-200, gnl|rn3|chr3 (59320229-59320570) | |
| 32-200, gnl|tetNig1|chrUn_random (42031252-42030912) | |
| 32-200, gnl|xenTro1|scaffold_546 (323017-323387) | |
| 203-506, gnl|bosTau2|chr2 (7859012-7859315) | |
| 203-506, gnl|canFam2|chr36 (25193477-25193801) | |
| 203-506, gnl|danRer3|chr9 (37654121-37654433) | |
| 203-506, gnl|dasNov1|scaffold_41173 (1286-952) | |
| 203-506, gnl|echTel1|scaffold_317123 (350251-349927) | |
| 203-506, gnl|fr1|chrUn (199947693-199948094) | |
| 203-506, gnl|galGal2|chr7 (16167982-16167658) | |
| 203-506, gnl|hg17|chr2 (179235606-179235930) | |
| 203-506, gnl|Hg17|chr2 (179235925-179235622) | |
| 203-506, gnl|loxAfr1|scaffold_7218 (46142-46466) | |
| 203-506, gnl|mm7|chr2 (76566465-76566783) | |
| 203-506, gnl|Mm7|chr2 (76566778-76566475) | |
| 203-506, gnl|monDom2|scaffold_2 (79391673-79391997) | |
| 203-506, gnl|oryCun1|scaffold_206234 (507091-506769) | |
| 203-506, gnl|panTro1|chr13 (69021401-69021725) | |
| 203-506, gnl|rheMac2|chr12 (42196551-42196875) | |
| 203-506, gnl|rn3|chr3 (59319797-59320115) | |
| 203-506, gnl|tetNig1|chrUn_random (42031730-42031336) | |
| 203-506, gnl|xenTro1|scaffold_546 (322596-322923) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) |