Ss1.1-Mixn-0005m06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAAAGTGAACTTCAGAACCACATTCAAACGGTCCACCGAGAGCTGGTGCCTGATGGCAA CAGCACGCAGTTGAAAACGCCGCAGGTGTCGCCCATGCCCAGAATCAGTCCCTCCCAGTC GGATGAGAAGAAGACCTATCAGTGCATCAAGTGTCAGATGGTTTTCTACAATGAATGGGA TATTCAGGTGCATGTTGCAAATCACATGATTGATGAAGGACTGAACCATGAATGCAAACT CTGCAGCCAGACCTTCGACTCCCCTGCCAAACTCCAGTGCCACCTGATCGAGCACAGCTT CGAAGGAATGGGTGGCACTTTCAAGTGTCCCGTTTGCTTTACAGTATTTGTTCAAGCAAA CAAGTTGCAGCAGCATATTTTCTCTGCTCATGGACAAGAAGACAAGATCTATGACTGCAC GCAATGTCCACAGAAGTTTTTCTTCCAAACAGAGCTGCAGAATCATACGATGACCCAACA CAGCAGTTAGTGCAAGCACGGGCTCTCAAGGAGAATGACTTTTGTGGCACAAAAAGGGAA CATGTTTTACTCTTTGCACGAAACTTTCATTGTTAATGTATATTATTCAGAAACATTGTA TTGTACCATAAAACTTGTATTATCAAAACTGTTGGATGTTCATGTGTTTGAACTTTTGAG CACCGGCTAGACCCCCCCTTGTATATAAAGTGTCTCACATGTATTATGTCGTCTGATACT AAAATGGTCTTATAAAGACAAGTGGACTTGGGCCCTATTCAGGCAAGATTTTTTTTTTTT AAATGGGAACAAAATGGCTTAAGAGAAAGTATTTTCAAGGAAGACATTAAAACAACCCTG TTACCCATGAAATTATGTTTGGACTTTTGGACTTCCTTTTCCTAACACTTAAGCCTAGAA TGTCTCTTTTGGTATCTCAACGGTTAAATCCAAGACTATTTTTTATTGCCGAAGATTCTT TCAGACCATGAAGAGATGTTCTCACAGAACAGAACCCTCCAGCTGGATAAGGCCCGTATA TATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCACTATATATGCAATAGTTGTTATG TAGACTGTCAAATTTTTTTTTTCCTGGATACATTTGAAGCTTTGAGTGTTCAAGGTTTTC CTTAATGATTTCACACAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGTTACTGTT ATTAATGTTTACTCTGCGGTCTGAACCTGGAGATTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAAAGTGAACTTCAGAACCACATTCAAACGGTCCACCGAGAGCTGGTGCCTGATGGCAA CAGCACGCAGTTGAAAACGCCGCAGGTGTCGCCCATGCCCAGAATCAGTCCCTCCCAGTC GGATGAGAAGAAGACCTATCAGTGCATCAAGTGTCAGATGGTTTTCTACAATGAATGGGA TATTCAGGTGCATGTTGCAAATCACATGATTGATGAAGGACTGAACCATGAATGCAAACT CTGCAGCCAGACCTTCGACTCCCCTGCCAAACTCCAGTGCCACCTGATCGAGCACAGCTT CGAAGGAATGGGTGGCACTTTCAAGTGTCCCGTTTGCTTTACAGTATTTGTTCAAGCAAA CAAGTTGCAGCAGCATATTTTCTCTGCTCATGGACAAGAAGACAAGATCTATGACTGCAC GCAATGTCCACAGAAGTTTTTCTTCCAAACAGAGCTGCAGAATCATACGATGACCCAACA CAGCAGTTAGTGCAAGCACGGGCTCTCAAGGAGAATGACTTTTGTGGCACAAAAAGGGAA CATGTTTTACTCTTTGCACGAAACTTTCATTGTTAATGTATATTATTCAGAAACATTGTA TTGTACCATAAAACTTGTATTATCAAAACTGTTGGATGTTCATGTGTTTGAACTTTTGAG CACCGGCTAGACCCCCCCTTGTATATAAAGTGTCTCACATGTATTATGTCGTCTGATACT AAAATGGTCTTATAAAGACAAGTGGACTTGGGCCCTATTCAGGCAAGATTTTTTTTTTTT AAATGGGAACAAAATGGCTTAAGAGAAAGTATTTTCAAGGAAGACATTAAAACAACCCTG TTACCCATGAAATTATGTTTGGACTTTTGGACTTCCTTTTCCTAACACTTAAGCCTAGAA TGTCTCTTTTGGTATCTCAACGGTTAAATCCAAGACTATTTTTTATTGCCGAAGATTCTT TCAGACCATGAAGAGATGTTCTCACAGAACAGAACCCTCCAGCTGGATAAGGCCCGTATA TATATTTGTAAGCCTTGCAATGTGACAGGTAGCATCACTATATATGCAATAGTTGTTATG TAGACTGTCAAATTTTTTTTTTCCTGGATACATTTGAAGCTTTGAGTGTTCAAGGTTTTC CTTAATGATTTCACACAGCCAAATTCTTGAATCAGTTGAACTAACCTGTATGTTACTGTT ATTAATGTTTACTCTGCGGTCTGAACCTGGAGATTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-127, gnl|bosTau2|chr24 (22599742-22599617) | |
| 2-127, gnl|canFam2|chr7 (66301215-66301044) | |
| 2-127, gnl|danRer3|chrNA (33877995-33877831) | |
| 2-127, gnl|dasNov1|scaffold_72548 (427-260) | |
| 2-127, gnl|echTel1|scaffold_316775 (156182-156011) | |
| 2-127, gnl|fr1|chrUn (125348755-125348919) | |
| 2-127, gnl|galGal2|chr2 (102939893-102940064) | |
| 2-127, gnl|hg17|chr18 (21058308-21058479) | |
| 2-127, gnl|Hg17|chr18 (21058432-21058307) | |
| 2-127, gnl|loxAfr1|scaffold_170 (77703-77874) | |
| 2-127, gnl|mm7|chr18 (14193121-14193292) | |
| 2-127, gnl|Mm7|chr18 (14193245-14193120) | |
| 2-127, gnl|monDom2|scaffold_21 (41037977-41038148) | |
| 2-127, gnl|oryCun1|scaffold_206241 (14484-14655) | |
| 2-127, gnl|panTro1|chr17 (16985980-16986151) | |
| 2-127, gnl|rheMac2|chr18 (18238640-18238811) | |
| 2-127, gnl|rn3|chr18 (5015156-5015330) | |
| 2-127, gnl|tetNig1|chr15 (6628568-6628744) | |
| 2-127, gnl|xenTro1|scaffold_410 (849719-849860) | |
| 212-344, gnl|bosTau2|chr18 (20756672-20756804) | |
| 212-344, gnl|canFam2|chr2 (68636563-68636416) | |
| 212-344, gnl|danRer3|chr18 (17617893-17618035) | |
| 212-344, gnl|dasNov1|scaffold_10267 (16209-16356) | |
| 212-344, gnl|echTel1|scaffold_322352 (213377-213524) | |
| 212-344, gnl|fr1|chrUn (326221097-326221239) | |
| 212-344, gnl|galGal2|chr11 (7035326-7035176) | |
| 212-344, gnl|hg17|chr16 (48116771-48116918) | |
| 212-344, gnl|Hg17|chr16 (48116907-48116775) | |
| 212-344, gnl|loxAfr1|scaffold_75463 (4920-5067) | |
| 212-344, gnl|mm7|chr8 (86280050-86280197) | |
| 212-344, gnl|Mm7|chr8 (86280186-86280054) | |
| 212-344, gnl|monDom2|scaffold_35 (14149911-14150061) | |
| 212-344, gnl|oryCun1|scaffold_211621 (7514-7661) | |
| 212-344, gnl|panTro1|chrUn_random (11942854-11943001) | |
| 212-344, gnl|rheMac2|chr20 (47721553-47721700) | |
| 212-344, gnl|rn3|chr19 (20718555-20718408) | |
| 212-344, gnl|tetNig1|chr15 (6603898-6604042) | |
| 212-344, gnl|xenTro1|scaffold_410 (766906-767050) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-127, gnl|bosTau2|chr24 (22599742-22599617) | |
| 2-127, gnl|canFam2|chr7 (66301215-66301044) | |
| 2-127, gnl|danRer3|chrNA (33877995-33877831) | |
| 2-127, gnl|dasNov1|scaffold_72548 (427-260) | |
| 2-127, gnl|echTel1|scaffold_316775 (156182-156011) | |
| 2-127, gnl|fr1|chrUn (125348755-125348919) | |
| 2-127, gnl|galGal2|chr2 (102939893-102940064) | |
| 2-127, gnl|hg17|chr18 (21058308-21058479) | |
| 2-127, gnl|Hg17|chr18 (21058432-21058307) | |
| 2-127, gnl|loxAfr1|scaffold_170 (77703-77874) | |
| 2-127, gnl|mm7|chr18 (14193121-14193292) | |
| 2-127, gnl|Mm7|chr18 (14193245-14193120) | |
| 2-127, gnl|monDom2|scaffold_21 (41037977-41038148) | |
| 2-127, gnl|oryCun1|scaffold_206241 (14484-14655) | |
| 2-127, gnl|panTro1|chr17 (16985980-16986151) | |
| 2-127, gnl|rheMac2|chr18 (18238640-18238811) | |
| 2-127, gnl|rn3|chr18 (5015156-5015330) | |
| 2-127, gnl|tetNig1|chr15 (6628568-6628744) | |
| 2-127, gnl|xenTro1|scaffold_410 (849719-849860) | |
| 212-344, gnl|bosTau2|chr18 (20756672-20756804) | |
| 212-344, gnl|canFam2|chr2 (68636563-68636416) | |
| 212-344, gnl|danRer3|chr18 (17617893-17618035) | |
| 212-344, gnl|dasNov1|scaffold_10267 (16209-16356) | |
| 212-344, gnl|echTel1|scaffold_322352 (213377-213524) | |
| 212-344, gnl|fr1|chrUn (326221097-326221239) | |
| 212-344, gnl|galGal2|chr11 (7035326-7035176) | |
| 212-344, gnl|hg17|chr16 (48116771-48116918) | |
| 212-344, gnl|Hg17|chr16 (48116907-48116775) | |
| 212-344, gnl|loxAfr1|scaffold_75463 (4920-5067) | |
| 212-344, gnl|mm7|chr8 (86280050-86280197) | |
| 212-344, gnl|Mm7|chr8 (86280186-86280054) | |
| 212-344, gnl|monDom2|scaffold_35 (14149911-14150061) | |
| 212-344, gnl|oryCun1|scaffold_211621 (7514-7661) | |
| 212-344, gnl|panTro1|chrUn_random (11942854-11943001) | |
| 212-344, gnl|rheMac2|chr20 (47721553-47721700) | |
| 212-344, gnl|rn3|chr19 (20718555-20718408) | |
| 212-344, gnl|tetNig1|chr15 (6603898-6604042) | |
| 212-344, gnl|xenTro1|scaffold_410 (766906-767050) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fce (0.271592) | |
| cbe (0.239234) | |
| ece (0.229305) | |
| fhi (0.169578) | |
| ese (0.126502) | |
| tra (0.123092) | |
| eje (0.0988338) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| cbe (0.239234) | |
| ece (0.229305) | |
| fhi (0.169578) | |
| ese (0.126502) | |
| tra (0.123092) | |
| eje (0.0988338) |