Ss1.1-Mixn-0006c18.5.5
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AAAAGCTCAAAGAGCTCATTTTTGAAGAGACCGCTCGATTCCAGCCAGGATACAGATCTT
AAATTTGTCAGGACACGGGCTCCAAGGACGGGACGTGCTCAGACGTCGGTGTTCTTCCTC
CCAGCTCCTGACCCCGGTCCTGTCTCCAGCCCATCTCGGCTTGTCCACCTTGACTCCTTT
GAGCCGTTCAGAGGGGCGGTTTCTGATAGTTGTGGCTTTTATGCTTTCAAAGAATTCCTT
CAGTCCAGAGAACTGTCCCTGGCAGCCCTGTGTGTGTCACCCCTGGTGGCCTGTGGCAGT
ATGTACTTCAGTGCACCTACTGCTTACCATTGCTTCAGTCACTAATCGCTTTCTGGTTTG
AAAGATGCAGTGGTTCCTCCATCCCACCGCTCTGCTGACCCTGTTCCTCGGGCACTTTAG
GGCAGCAGTGACCCCTCTTTGCACTTCTCCTCCCGCCCTGGCCAGGTCCCGGCTGGGCAA
CCTGCAGCTCGAGCTCTGTCTCAGGGCCCTGAGGGCGCTCATCCGCATCCTTCTCAATCA
CGTTAATCACTAGCGTGTGTAAGGTATGTGCTCTTGCCCAGCTTTTAGAAAATTCAGTCA
TTTTTCTAAATAAAAGCAAGAAGTACTGCATCCAGCATTTCCACTTGTACCATTTATAGA
GGCATGACACTTGCCAAAATATGTGCAGTCCTGGGTGTTTGCAAAGCTTATGCAAAAAAG
ATTCAAAGTGGCAGCTCCTCTCAGGATTTCATGAGAGGTGATGGGGTCACGTGGGCTGCC
CAGGGTCATGGGCAGTGCTCCACATTGGGGCATGTCCACCCTGGAGCTGCTCACGCATAC
CTGGTTCACCATGACCACACTCAATGCCTGAGGGCTTAGCGGAAAGGAACACTGCATCTT
TAAATGAGAAAGTGTACACTTCCTTCCTTCCTACAGCATGTCCGCATCTCAAGGTCCTTT
CAGCCTCCGAGCCCTCATGAGCTCGTGCCGTGAAGCGCTGTTCTGTCAGGTGCTCTAATG
TCTGATGCTGCAGGGCTGAGGCCGGCAGGAGACGCTAGCGCTAGGTTGTGTGTGGAGCCC
TCGCCCATCCCCTCCCTATCTCTAACTGCCGCTCCTGCCACTGCACCCTGTGGCCTTGAC
TCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTGACCCCCACTGCTCTGGTGAGAAACCTG
CCTTGTTGAGTAACCACTGTACCCTCGCATGACTGTTACAGCTTTCTGTGCGGAGATGAC
TGTCCAAGTGCCACATCCCATGATTGAGTTGTGTTCCACGGAAAATGCTATCCAGCAGAC
CACTTAGGAAAAATAATCCTATTTTTAGCTTTTCATTTCTCAGCTGTCCTTTTTTTCTTG
TTTGATTTTTGACAGCAGTGGAGAATGGGTTATATAAAGACTGCCTGCTAATATGAACAG
ACATGCACTTGTAATTCATGAAAATAAATGTACATCTTCTATCTTCATTTCATGTTAAGA
TTCAGTGTTGATTTCCTCTGGATCAGTGTGTCCGAATGGACAGTCAGAAAGACTAATGGG
CCTCACCTTCCCACTCAGGCACTGCCCGACCACTTTGGTTTACATAAGATGACTTAGAAG
GCATTTCTGGGGGGTTCTCTTTTCCTTCTGCACAGCAGAGACTCAGTTCTGACATGTTCC
TTTATTCAGCCACAGGTCTCCAGTGTTGTGTCAGACTCTGATGAAGCAGCCCAATCATCT
CAGGTTGGGTTCTCTGGTTCATTCTAAAGAGGGCCAGTCTGTATTCCAGGCAACTGCCAG
AGGGCTGTGCACACCCCTAGCCCAGCATGCTGATGTGCACACACCCGGGGGCTGACTGGC
CCTCAGAAATCAGAACCACACCTCCATGCGCAGAGCTGCTCTCTGAAGGTCCACACGGCA
TTGAAAAGTTAGAGACTGACTGATCTTTGATATGTTCTAAAAGGAGCA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AAAAGCTCAAAGAGCTCATTTTTGAAGAGACCGCTCGATTCCAGCCAGGATACAGATCTT
AAATTTGTCAGGACACGGGCTCCAAGGACGGGACGTGCTCAGACGTCGGTGTTCTTCCTC
CCAGCTCCTGACCCCGGTCCTGTCTCCAGCCCATCTCGGCTTGTCCACCTTGACTCCTTT
GAGCCGTTCAGAGGGGCGGTTTCTGATAGTTGTGGCTTTTATGCTTTCAAAGAATTCCTT
CAGTCCAGAGAACTGTCCCTGGCAGCCCTGTGTGTGTCACCCCTGGTGGCCTGTGGCAGT
ATGTACTTCAGTGCACCTACTGCTTACCATTGCTTCAGTCACTAATCGCTTTCTGGTTTG
AAAGATGCAGTGGTTCCTCCATCCCACCGCTCTGCTGACCCTGTTCCTCGGGCACTTTAG
GGCAGCAGTGACCCCTCTTTGCACTTCTCCTCCCGCCCTGGCCAGGTCCCGGCTGGGCAA
CCTGCAGCTCGAGCTCTGTCTCAGGGCCCTGAGGGCGCTCATCCGCATCCTTCTCAATCA
CGTTAATCACTAGCGTGTGTAAGGTATGTGCTCTTGCCCAGCTTTTAGAAAATTCAGTCA
TTTTTCTAAATAAAAGCAAGAAGTACTGCATCCAGCATTTCCACTTGTACCATTTATAGA
GGCATGACACTTGCCAAAATATGTGCAGTCCTGGGTGTTTGCAAAGCTTATGCAAAAAAG
ATTCAAAGTGGCAGCTCCTCTCAGGATTTCATGAGAGGTGATGGGGTCACGTGGGCTGCC
CAGGGTCATGGGCAGTGCTCCACATTGGGGCATGTCCACCCTGGAGCTGCTCACGCATAC
CTGGTTCACCATGACCACACTCAATGCCTGAGGGCTTAGCGGAAAGGAACACTGCATCTT
TAAATGAGAAAGTGTACACTTCCTTCCTTCCTACAGCATGTCCGCATCTCAAGGTCCTTT
CAGCCTCCGAGCCCTCATGAGCTCGTGCCGTGAAGCGCTGTTCTGTCAGGTGCTCTAATG
TCTGATGCTGCAGGGCTGAGGCCGGCAGGAGACGCTAGCGCTAGGTTGTGTGTGGAGCCC
TCGCCCATCCCCTCCCTATCTCTAACTGCCGCTCCTGCCACTGCACCCTGTGGCCTTGAC
TCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTGACCCCCACTGCTCTGGTGAGAAACCTG
CCTTGTTGAGTAACCACTGTACCCTCGCATGACTGTTACAGCTTTCTGTGCGGAGATGAC
TGTCCAAGTGCCACATCCCATGATTGAGTTGTGTTCCACGGAAAATGCTATCCAGCAGAC
CACTTAGGAAAAATAATCCTATTTTTAGCTTTTCATTTCTCAGCTGTCCTTTTTTTCTTG
TTTGATTTTTGACAGCAGTGGAGAATGGGTTATATAAAGACTGCCTGCTAATATGAACAG
ACATGCACTTGTAATTCATGAAAATAAATGTACATCTTCTATCTTCATTTCATGTTAAGA
TTCAGTGTTGATTTCCTCTGGATCAGTGTGTCCGAATGGACAGTCAGAAAGACTAATGGG
CCTCACCTTCCCACTCAGGCACTGCCCGACCACTTTGGTTTACATAAGATGACTTAGAAG
GCATTTCTGGGGGGTTCTCTTTTCCTTCTGCACAGCAGAGACTCAGTTCTGACATGTTCC
TTTATTCAGCCACAGGTCTCCAGTGTTGTGTCAGACTCTGATGAAGCAGCCCAATCATCT
CAGGTTGGGTTCTCTGGTTCATTCTAAAGAGGGCCAGTCTGTATTCCAGGCAACTGCCAG
AGGGCTGTGCACACCCCTAGCCCAGCATGCTGATGTGCACACACCCGGGGGCTGACTGGC
CCTCAGAAATCAGAACCACACCTCCATGCGCAGAGCTGCTCTCTGAAGGTCCACACGGCA
TTGAAAAGTTAGAGACTGACTGATCTTTGATATGTTCTAAAAGGAGCA
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69-380, gnl|bosTau2|chr17 (45531390-45531100) |
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69-380, gnl|canFam2|chr26 (34080047-34080275) |
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69-380, gnl|dasNov1|scaffold_111136 (3202-2980) |
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69-380, gnl|echTel1|scaffold_317850 (78356-78564) |
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69-380, gnl|galGal2|chr15 (514745-514515) |
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69-380, gnl|hg17|chr22 (20442728-20442955) |
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69-380, gnl|Hg17|chr22 (20443086-20442773) |
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69-380, gnl|loxAfr1|scaffold_11360 (7707-7930) |
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69-380, gnl|mm7|chr16 (16593747-16593545) |
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69-380, gnl|Mm7|chr16 (16593417-16593702) |
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69-380, gnl|monDom2|scaffold_214 (797627-797459) |
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69-380, gnl|oryCun1|scaffold_204714 (8592-8816) |
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69-380, gnl|panTro1|chr23 (20470721-20470948) |
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69-380, gnl|rheMac2|chr10 (65518592-65518819) |
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69-380, gnl|rn3|chr11 (86009217-86009415) |
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69-380, gnl|xenTro1|scaffold_118 (229752-229517) |
| |
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1285-1547, gnl|bosTau2|chr17 (45530413-45530151) |
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1285-1547, gnl|Hg17|chr22 (20441633-20441371) |
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1285-1547, gnl|Mm7|chr16 (16594789-16595075) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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69-380, gnl|bosTau2|chr17 (45531390-45531100) |
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69-380, gnl|canFam2|chr26 (34080047-34080275) |
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69-380, gnl|dasNov1|scaffold_111136 (3202-2980) |
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69-380, gnl|echTel1|scaffold_317850 (78356-78564) |
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69-380, gnl|galGal2|chr15 (514745-514515) |
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69-380, gnl|hg17|chr22 (20442728-20442955) |
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69-380, gnl|Hg17|chr22 (20443086-20442773) |
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69-380, gnl|loxAfr1|scaffold_11360 (7707-7930) |
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69-380, gnl|mm7|chr16 (16593747-16593545) |
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69-380, gnl|Mm7|chr16 (16593417-16593702) |
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69-380, gnl|monDom2|scaffold_214 (797627-797459) |
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69-380, gnl|oryCun1|scaffold_204714 (8592-8816) |
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69-380, gnl|panTro1|chr23 (20470721-20470948) |
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69-380, gnl|rheMac2|chr10 (65518592-65518819) |
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69-380, gnl|rn3|chr11 (86009217-86009415) |
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69-380, gnl|xenTro1|scaffold_118 (229752-229517) |
| |
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1285-1547, gnl|bosTau2|chr17 (45530413-45530151) |
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1285-1547, gnl|Hg17|chr22 (20441633-20441371) |
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1285-1547, gnl|Mm7|chr16 (16594789-16595075) |
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fcc (0.593354) |
|
nlu (0.383362) |
|
sto (0.359648) |
|
spl (0.286369) |
|
pla (0.267344) |
|
eru (0.240096) |
|
cbe (0.239234) |
|
cty (0.20816) |
|
nep (0.183925) |
|
gul (0.177588) |
|
rec (0.17307) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
mga (0.160205) |
|
lun (0.150489) |
|
fat (0.147427) |
|
ski (0.146735) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
che (0.136314) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
thg (0.126791) |
|
pgl (0.118483) |
|
fcc (0.593354) |
|
nlu (0.383362) |
|
sto (0.359648) |
|
spl (0.286369) |
|
pla (0.267344) |
|
eru (0.240096) |
|
cbe (0.239234) |
|
cty (0.20816) |
|
nep (0.183925) |
|
gul (0.177588) |
|
rec (0.17307) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
mga (0.160205) |
|
lun (0.150489) |
|
fat (0.147427) |
|
ski (0.146735) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
che (0.136314) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
thg (0.126791) |
|
pgl (0.118483) |
