Non-Coding RNA Search

Ss1.1-Mixn-0006e18.5

Sequence:


               
               GACGAGGAACCAGCCTGTGAGGGCGGCCGCTGCGTCAACACCATAGGCTCTTATCACTGC
ACGTGCGAGCCCCCACTGGTGCTGGACGGCTCGCGGCGCCGCTGCGTCTCCAACGAGAGC
CAGAGCCTCGACGACAATCTGGGAGTGTGCTGGCAGGAAGTGGGGGCCGACCTCGTGTGC
AGTCATCCTCGTCTCGATCGACAGGCCACCTACACAGAGTGCTGCTGCCTCTATGGAGAG
GCCTGGGGCATGGACTGTGCCCTCTGCCCCGCCCAGGACTCAGATGACTTTGAGGCCCTG
TGCAATGTGCTGCGCCCCCCTGCCTATGGACCCCCGCGGCCAGGTGGCTTTGGACTCCCC
TACGAGTATGGCCTGGACCTAGGTCCACCTTACCAGGGCCTTCCCTATGGACCTGAGTTG
TACCCACCACCCGTCCTACCCTATGACCCCTACCCTCCCCCACCTGGGCCCTTCGCCCGC
CGGGAGGCCCCCTACGGGACACCACCCTTCGATATGCCTGACTTTGAGGACGATGGTGGC
CCTTACGGTGAATCTGAGGCTCCTGGTCCACCCGGCCCGGGCACCCGCTGGCGCTACCGG
TCCCGGGACACCCGTGGCTCCTTCCCTGAGCCTGAGGAGTCACCTGAAGGTGGAAGCTAT
GCTGGCTCCCGGGCTGGCGCCTACGAGGGGCTGGAGGCCGAAGAGTGCGGGATCCTGGAC
GGCTGCGCCCATGGCCGCTGCGTGCGTGTCCCCGAGGGCTTCACCTGTGACTGCTTCGAC
GGCTACCGCCTGGACATGACCCGCATGGCCTGCGTTGACATCAACGAGTGTGACGAGGCC
GAAGCAGCCTCCCCGCTCTGCATCAACGCGCGCTGCGTCAACACCGACGGCTCCTTCCGC
TGTATCTGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGAGGAACCAGCCTGTGAGGGCGGCCGCTGCGTCAACACCATAGGCTCTTATCACTGC
ACGTGCGAGCCCCCACTGGTGCTGGACGGCTCGCGGCGCCGCTGCGTCTCCAACGAGAGC
CAGAGCCTCGACGACAATCTGGGAGTGTGCTGGCAGGAAGTGGGGGCCGACCTCGTGTGC
AGTCATCCTCGTCTCGATCGACAGGCCACCTACACAGAGTGCTGCTGCCTCTATGGAGAG
GCCTGGGGCATGGACTGTGCCCTCTGCCCCGCCCAGGACTCAGATGACTTTGAGGCCCTG
TGCAATGTGCTGCGCCCCCCTGCCTATGGACCCCCGCGGCCAGGTGGCTTTGGACTCCCC
TACGAGTATGGCCTGGACCTAGGTCCACCTTACCAGGGCCTTCCCTATGGACCTGAGTTG
TACCCACCACCCGTCCTACCCTATGACCCCTACCCTCCCCCACCTGGGCCCTTCGCCCGC
CGGGAGGCCCCCTACGGGACACCACCCTTCGATATGCCTGACTTTGAGGACGATGGTGGC
CCTTACGGTGAATCTGAGGCTCCTGGTCCACCCGGCCCGGGCACCCGCTGGCGCTACCGG
TCCCGGGACACCCGTGGCTCCTTCCCTGAGCCTGAGGAGTCACCTGAAGGTGGAAGCTAT
GCTGGCTCCCGGGCTGGCGCCTACGAGGGGCTGGAGGCCGAAGAGTGCGGGATCCTGGAC
GGCTGCGCCCATGGCCGCTGCGTGCGTGTCCCCGAGGGCTTCACCTGTGACTGCTTCGAC
GGCTACCGCCTGGACATGACCCGCATGGCCTGCGTTGACATCAACGAGTGTGACGAGGCC
GAAGCAGCCTCCCCGCTCTGCATCAACGCGCGCTGCGTCAACACCGACGGCTCCTTCCGC
TGTATCTGCCGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               126-283, gnl|bosTau2|chr18 (41624890-41625048)
               

               
               126-283, gnl|Hg17|chr19 (45823596-45823754)
               

               
               126-283, gnl|Mm7|chr7 (24226785-24226627)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-283, gnl|bosTau2|chr18 (41624890-41625048)
               

               
               126-283, gnl|Hg17|chr19 (45823596-45823754)
               

               
               126-283, gnl|Mm7|chr7 (24226785-24226627)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               jca (0.22792)
               

               
               mcp (0.170648)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.22792)
               

               
               mcp (0.170648)

	126-283, gnl\|bosTau2\|chr18 (41624890-41625048)
	126-283, gnl\|Hg17\|chr19 (45823596-45823754)
	126-283, gnl\|Mm7\|chr7 (24226785-24226627)