Ss1.1-Mixn-0006e23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACTCCGCAGCAGACCAAAATTACCCAGGATATCTTCCAGCGGTTGTTCACTCGAGGTTT TGTGCTGCAAGATACTGTGGAGCAACTGCGGTGTGAACACTGTGCCCGCTTCCTGGCTGA CCGCTTTGTGGAGGGCGTGTGTCCCTTCTGTGGCTACGAGGAGGCCCGGGGTGACCAATG TGACAAGTGTGGCAAGCTCATCAATGCCATTGAGCTCAAGAAACCCCAGTGTAAAGTCTG TCGGTCGTGCCCTGTGGTGAAATCCTCTCGGCACCTGTTTCTGGACTTGCCTAAGCTGGA AAAGCGGCTGGAGGAGTGGTTGGAGAAGACATTGCCTGGCAGTGACTGGACACCCAACGC CCGGTTCATCATTCGTTCTTGGCTTCGGGACGGCCTCAAGCCACGTTGCATAACTCGAGA CCTCAAATGGGGAACCCCTGTCCCCTTAGAAGGTTTGGAGGACAAGGTATTCTATGTCTG GTTTGATGCCACTATGGGCTACTTGTCCATCACAGCCAACTACACAGACCAATGGGAGAG ATGGTGGAAGAACCCAGAGCAAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACTCCGCAGCAGACCAAAATTACCCAGGATATCTTCCAGCGGTTGTTCACTCGAGGTTT TGTGCTGCAAGATACTGTGGAGCAACTGCGGTGTGAACACTGTGCCCGCTTCCTGGCTGA CCGCTTTGTGGAGGGCGTGTGTCCCTTCTGTGGCTACGAGGAGGCCCGGGGTGACCAATG TGACAAGTGTGGCAAGCTCATCAATGCCATTGAGCTCAAGAAACCCCAGTGTAAAGTCTG TCGGTCGTGCCCTGTGGTGAAATCCTCTCGGCACCTGTTTCTGGACTTGCCTAAGCTGGA AAAGCGGCTGGAGGAGTGGTTGGAGAAGACATTGCCTGGCAGTGACTGGACACCCAACGC CCGGTTCATCATTCGTTCTTGGCTTCGGGACGGCCTCAAGCCACGTTGCATAACTCGAGA CCTCAAATGGGGAACCCCTGTCCCCTTAGAAGGTTTGGAGGACAAGGTATTCTATGTCTG GTTTGATGCCACTATGGGCTACTTGTCCATCACAGCCAACTACACAGACCAATGGGAGAG ATGGTGGAAGAACCCAGAGCAAGT |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 16-220, gnl|bosTau2|chr5 (34788076-34787872) | |
| 16-220, gnl|canFam2|chr10 (4577411-4577589) | |
| 16-220, gnl|danRer3|chrUn (40114508-40114686) | |
| 16-220, gnl|dasNov1|scaffold_143181 (591-412) | |
| 16-220, gnl|echTel1|scaffold_307962 (135-313) | |
| 16-220, gnl|fr1|chrUn (269345660-269345482) | |
| 16-220, gnl|galGal2|chrUn (102079173-102078994) | |
| 16-220, gnl|hg17|chr12 (56180364-56180542) | |
| 16-220, gnl|Hg17|chr12 (56180368-56180572) | |
| 16-220, gnl|loxAfr1|scaffold_110643 (4393-4215) | |
| 16-220, gnl|mm7|chr10 (126805791-126805613) | |
| 16-220, gnl|Mm7|chr10 (126805785-126805581) | |
| 16-220, gnl|panTro1|chr10 (57427392-57427570) | |
| 16-220, gnl|rheMac2|chr11 (54577402-54577580) | |
| 16-220, gnl|rn3|chr7 (67282396-67282218) | |
| 16-220, gnl|tetNig1|chr11 (2664563-2664390) | |
| 16-220, gnl|xenTro1|scaffold_34 (3316331-3316153) | |
| 294-469, gnl|bosTau2|chr5 (34781413-34781238) | |
| 294-469, gnl|Hg17|chr12 (56191746-56191921) | |
| 294-469, gnl|Mm7|chr10 (126801978-126801803) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-220, gnl|bosTau2|chr5 (34788076-34787872) | |
| 16-220, gnl|canFam2|chr10 (4577411-4577589) | |
| 16-220, gnl|danRer3|chrUn (40114508-40114686) | |
| 16-220, gnl|dasNov1|scaffold_143181 (591-412) | |
| 16-220, gnl|echTel1|scaffold_307962 (135-313) | |
| 16-220, gnl|fr1|chrUn (269345660-269345482) | |
| 16-220, gnl|galGal2|chrUn (102079173-102078994) | |
| 16-220, gnl|hg17|chr12 (56180364-56180542) | |
| 16-220, gnl|Hg17|chr12 (56180368-56180572) | |
| 16-220, gnl|loxAfr1|scaffold_110643 (4393-4215) | |
| 16-220, gnl|mm7|chr10 (126805791-126805613) | |
| 16-220, gnl|Mm7|chr10 (126805785-126805581) | |
| 16-220, gnl|panTro1|chr10 (57427392-57427570) | |
| 16-220, gnl|rheMac2|chr11 (54577402-54577580) | |
| 16-220, gnl|rn3|chr7 (67282396-67282218) | |
| 16-220, gnl|tetNig1|chr11 (2664563-2664390) | |
| 16-220, gnl|xenTro1|scaffold_34 (3316331-3316153) | |
| 294-469, gnl|bosTau2|chr5 (34781413-34781238) | |
| 294-469, gnl|Hg17|chr12 (56191746-56191921) | |
| 294-469, gnl|Mm7|chr10 (126801978-126801803) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.132153) | |
| eje (0.0988338) |