Ss1.1-Mixn-0007c18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGATTGAGTGGGAATGTGATCTTGATAGACCTCCCTCTGAATGCAACCCTCGCTATTA TTTTAACCGTCTGGACAACAGATTTTCAGAAAACTCTATCTCCTCTGGGTACAACTTCAG GTTTGCCAAATATTACCGAGACGCGGCTGGGGTGGAGTTCCGCACGCTGTTTAAAGCCTA TGGGATCCGCTTTGATGTGATGGTGAACGGCAAGGCGGGGAAGTTCAGCATCATCCCCAC CATCATCAACGTGGGCTCCGGAGTGGCACTCATGGGCGTGGGGTCTTTCTTCTGTGACCT GGTGCTCATCTACTTCATCAAAAAGAGCAACTTTTACCGAGACAAGAAATACGAGGAAGT GAGGGACCTCGAGGGCCTCGCCCAGATGGCGGAGTCCTCGCGGCAGAGGGTGGCCCCGGA CACAGCAGGGCTGGCAGAGCAACCCGAGGTGCAGGATGGAGGCAGCGGCCAGAAGGAGAA TGGCTGTGTGTGCAGGCAGCTCCTCCAGCCCACCAGGTGAGGGCTGCCCAGCAGAGGGCC CGGAACAAGACCTGCAGAGATTGCCCAGCTGGCTACTCTGGCCACCAGGAGAATGGAAAG GTCACTGTGGAGCCGCTGCAGAACCTGCAGGCCGTGGAGGCGTAGCCAGAGGTGTCGCTG AGCAGATGTGATGAAGATACACAACGGCCTGCAGCTCTGACTCGGAAAGGGTCGTCGTCC GCAAGGGACCGGGCTTCCAGGCACGGCCATCTCTCTGGCACTTTGGGATCTTGCCACAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGATTGAGTGGGAATGTGATCTTGATAGACCTCCCTCTGAATGCAACCCTCGCTATTA TTTTAACCGTCTGGACAACAGATTTTCAGAAAACTCTATCTCCTCTGGGTACAACTTCAG GTTTGCCAAATATTACCGAGACGCGGCTGGGGTGGAGTTCCGCACGCTGTTTAAAGCCTA TGGGATCCGCTTTGATGTGATGGTGAACGGCAAGGCGGGGAAGTTCAGCATCATCCCCAC CATCATCAACGTGGGCTCCGGAGTGGCACTCATGGGCGTGGGGTCTTTCTTCTGTGACCT GGTGCTCATCTACTTCATCAAAAAGAGCAACTTTTACCGAGACAAGAAATACGAGGAAGT GAGGGACCTCGAGGGCCTCGCCCAGATGGCGGAGTCCTCGCGGCAGAGGGTGGCCCCGGA CACAGCAGGGCTGGCAGAGCAACCCGAGGTGCAGGATGGAGGCAGCGGCCAGAAGGAGAA TGGCTGTGTGTGCAGGCAGCTCCTCCAGCCCACCAGGTGAGGGCTGCCCAGCAGAGGGCC CGGAACAAGACCTGCAGAGATTGCCCAGCTGGCTACTCTGGCCACCAGGAGAATGGAAAG GTCACTGTGGAGCCGCTGCAGAACCTGCAGGCCGTGGAGGCGTAGCCAGAGGTGTCGCTG AGCAGATGTGATGAAGATACACAACGGCCTGCAGCTCTGACTCGGAAAGGGTCGTCGTCC GCAAGGGACCGGGCTTCCAGGCACGGCCATCTCTCTGGCACTTTGGGATCTTGCCACAAG |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 2-122, gnl|bosTau2|chr19 (18947847-18947727) | |
| 2-122, gnl|canFam2|chr9 (50835268-50835356) | |
| 2-122, gnl|danRer3|chr5 (46465208-46465117) | |
| 2-122, gnl|dasNov1|scaffold_153692 (7239-7151) | |
| 2-122, gnl|echTel1|scaffold_177424 (3329-3241) | |
| 2-122, gnl|fr1|chrUn (186657951-186657866) | |
| 2-122, gnl|galGal2|chr19 (6206004-6205916) | |
| 2-122, gnl|hg17|chr17 (3538667-3538752) | |
| 2-122, gnl|Hg17|chr17 (3538784-3538667) | |
| 2-122, gnl|loxAfr1|scaffold_1534 (24098-24010) | |
| 2-122, gnl|mm7|chr11 (73249205-73249120) | |
| 2-122, gnl|Mm7|chr11 (73249086-73249203) | |
| 2-122, gnl|oryCun1|scaffold_205827 (31318-31233) | |
| 2-122, gnl|panTro1|chr19 (3834542-3834627) | |
| 2-122, gnl|rheMac2|chr16 (3414921-3415006) | |
| 2-122, gnl|rn3|chr10 (60056327-60056242) | |
| 2-122, gnl|tetNig1|chr7 (2151637-2151552) | |
| 2-122, gnl|xenTro1|scaffold_403 (947801-947889) | |
| 362-571, gnl|bosTau2|chr19 (18943844-18943633) | |
| 362-571, gnl|Hg17|chr17 (3529829-3529571) | |
| 577-780, gnl|bosTau2|chr19 (18942321-18942119) | |
| 577-780, gnl|Hg17|chr17 (3528178-3527970) | |
| 577-780, gnl|Mm7|chr11 (73253340-73253566) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-122, gnl|bosTau2|chr19 (18947847-18947727) | |
| 2-122, gnl|canFam2|chr9 (50835268-50835356) | |
| 2-122, gnl|danRer3|chr5 (46465208-46465117) | |
| 2-122, gnl|dasNov1|scaffold_153692 (7239-7151) | |
| 2-122, gnl|echTel1|scaffold_177424 (3329-3241) | |
| 2-122, gnl|fr1|chrUn (186657951-186657866) | |
| 2-122, gnl|galGal2|chr19 (6206004-6205916) | |
| 2-122, gnl|hg17|chr17 (3538667-3538752) | |
| 2-122, gnl|Hg17|chr17 (3538784-3538667) | |
| 2-122, gnl|loxAfr1|scaffold_1534 (24098-24010) | |
| 2-122, gnl|mm7|chr11 (73249205-73249120) | |
| 2-122, gnl|Mm7|chr11 (73249086-73249203) | |
| 2-122, gnl|oryCun1|scaffold_205827 (31318-31233) | |
| 2-122, gnl|panTro1|chr19 (3834542-3834627) | |
| 2-122, gnl|rheMac2|chr16 (3414921-3415006) | |
| 2-122, gnl|rn3|chr10 (60056327-60056242) | |
| 2-122, gnl|tetNig1|chr7 (2151637-2151552) | |
| 2-122, gnl|xenTro1|scaffold_403 (947801-947889) | |
| 362-571, gnl|bosTau2|chr19 (18943844-18943633) | |
| 362-571, gnl|Hg17|chr17 (3529829-3529571) | |
| 577-780, gnl|bosTau2|chr19 (18942321-18942119) | |
| 577-780, gnl|Hg17|chr17 (3528178-3527970) | |
| 577-780, gnl|Mm7|chr11 (73253340-73253566) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fty (0.17584) | |
| hyp (0.142837) | |
| lnt (0.142308) | |
| che (0.136314) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| hyp (0.142837) | |
| lnt (0.142308) | |
| che (0.136314) |