Non-Coding RNA Search

Ss1.1-Mixn-0007d02.5

Sequence:


               
               TGCGACCGAATGTCAAATATCCTTGGGGACCTTTAAAACTGAGAATAGATGAAACCAGAA
TTGTGGAGCACACAAACAGCTCTCCTTGCAAAGCATGTGGCCTAGAAGAATCAGCAGTGA
CAGGAATTGTTGTGGGGGCCTTACTAGGAGCTGGCTTGCTAATGGCCTTCTACTTTTTCA
GGAAGAAATACAGAATAACCATTGAGAGGCGAAACCAGCAAGAAGAGAGTAACATCGGAA
AACATCGGGAGTTACGGGAAGATTCCATCAGATCCCATTTTTCGGTGGCTTAAAAGGAAG
TCTGTTCTTTTGGCTTGAGATTCTTTAAGGAGATAGATGGGATGAAAGACATCAATGGAA
CAGAAGGGGCAATCCCGAAGAACTCATTCTTTTAAGCAGTTAGTCATTTCGTTGTTAAAT
TTCTTTAGAAGCTCAGGAACTATTATTAATCACCATATGCCTCCCAGCCTTTCATCTCAT
GACAAACAAATATAAGAATATAATGTCACTCTGTTAAATGTTCATACTGTTTTCAAGGGC
ATATGATTAGACTTATGTTTTGAAAGTCTGATGTCTCCATATCTTGATGGCTTTGGGGGG
CATTTCACACAAGGATATAACATGTGTTTTTCTTAAATGAAATGTTTTATAGCTAGAATA
AAATAATTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGACCGAATGTCAAATATCCTTGGGGACCTTTAAAACTGAGAATAGATGAAACCAGAA
TTGTGGAGCACACAAACAGCTCTCCTTGCAAAGCATGTGGCCTAGAAGAATCAGCAGTGA
CAGGAATTGTTGTGGGGGCCTTACTAGGAGCTGGCTTGCTAATGGCCTTCTACTTTTTCA
GGAAGAAATACAGAATAACCATTGAGAGGCGAAACCAGCAAGAAGAGAGTAACATCGGAA
AACATCGGGAGTTACGGGAAGATTCCATCAGATCCCATTTTTCGGTGGCTTAAAAGGAAG
TCTGTTCTTTTGGCTTGAGATTCTTTAAGGAGATAGATGGGATGAAAGACATCAATGGAA
CAGAAGGGGCAATCCCGAAGAACTCATTCTTTTAAGCAGTTAGTCATTTCGTTGTTAAAT
TTCTTTAGAAGCTCAGGAACTATTATTAATCACCATATGCCTCCCAGCCTTTCATCTCAT
GACAAACAAATATAAGAATATAATGTCACTCTGTTAAATGTTCATACTGTTTTCAAGGGC
ATATGATTAGACTTATGTTTTGAAAGTCTGATGTCTCCATATCTTGATGGCTTTGGGGGG
CATTTCACACAAGGATATAACATGTGTTTTTCTTAAATGAAATGTTTTATAGCTAGAATA
AAATAATTTTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               179-671, gnl|bosTau2|chr20 (26767778-26768267)
               

               
               179-671, gnl|Hg17|chr5 (32822094-32822596)
               

               
               179-671, gnl|Mm7|chr15 (11905272-11904775)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               179-671, gnl|bosTau2|chr20 (26767778-26768267)
               

               
               179-671, gnl|Hg17|chr5 (32822094-32822596)
               

               
               179-671, gnl|Mm7|chr15 (11905272-11904775)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               vin (0.332557)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)

	179-671, gnl\|bosTau2\|chr20 (26767778-26768267)
	179-671, gnl\|Hg17\|chr5 (32822094-32822596)
	179-671, gnl\|Mm7\|chr15 (11905272-11904775)