Non-Coding RNA Search

Ss1.1-Mixn-0007k15.5

Sequence:


               
               GCACGCCTGCCACGTCTGCGGCAAGAGCTTCAAGTTCCCCGGGACCCTCAGCCGCCACCG
CAAGGCCCACGGCCGCGAGGAGCCCGGGGACGAGAGCGCGCCTCCCGGGGAGGCCGAGGG
GCCGCCGCCCGCCACCCCCGCGCACCCGGAGCTGCCCCAGAGGCCGGCCGAGCCCCTGGG
CGCCGGCCCCGGGGAGGCCGCGTCGGAAGCGCCTGTGGAGCAGCAGAGCGAGGAGGCGGA
CGGCCCCTCGGATGCGGACGGGGAGGGCCCGGCCGAGAAGAAGTCCTCGGAGAAGAGCGA
CGACGACAAGAAGCCAAAGACAGACGCCCCCCGGAGCACGGCCAGCAAGGCGGACAAGAG
GAAGAAGGTGTGCGGCGTGTGCAGCAAGAGGTTCTGGTCCCTGCAGGACCTGACCCGGCA
CATGAGGTCGCACACAGGCGAGAGGCCGTACAAGTGTCAGACCTGCGAGCGAACCTTCAC
CTTGAAGCACAGCCTGGTTCGCCACCAGCGGGTCCACCAGAAAGCCCGGCACGCCAGACA
CCACGGGAAGGACAGCGACAAGGAGCGGGGCGAGGAGGACAGCGAGAGCGAGTCCACCCA
CAGCGGCAACAACCCCGTGTCGGAGAACGAGGCGGACTCGGCCCTGCTCGCCAGCAACCA
CGTGGCCGTCACGCGGAGCCGGAAGGAGAGCCTGGCCTCCAAGGACGCCGGCCGCCAGGA
GAAGAGGGCGGCAGGCCGGACGGCGGGTGGCGGCGGCCAGGCCGCCGAGGGCAGCCCGGA
GGAGCAGGCGTCTCAGGGTGAGCCTGACCGGGAGAGCCCCGCGGCCCCGGCGCAGGACCT
GCCGGCGCTGCCCGGCAAGAGGCCCGCCCACCCCATCCTGGCCGCCGAAGGCGCCGCGCT
CCTGGGCATGGAGTGACGGCCGGCCTGCCCCCCAGCACACAGACGAAAGCCAGCAGAGCA
CCTTGTCCGGGGGCTCCCTCCGCGAGGTATCCCGGTGCCCTTCAGCTGTCGGGGGCAGCG
GAGGGAGGGAGCCAGGCGGGCCTCGCTCGGTGCCATAGCCTTACAGACCCGTGCGGGGAT
GGACCACGCGGGACCCGAGTGCCTAACTACTACAGCCCTCTGGAGTCGTCCCGGGGGTTG
TGTTTCCCACAAGGACTTTTTAAAAAAAAACAAAGCAAGTATTTTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACGCCTGCCACGTCTGCGGCAAGAGCTTCAAGTTCCCCGGGACCCTCAGCCGCCACCG
CAAGGCCCACGGCCGCGAGGAGCCCGGGGACGAGAGCGCGCCTCCCGGGGAGGCCGAGGG
GCCGCCGCCCGCCACCCCCGCGCACCCGGAGCTGCCCCAGAGGCCGGCCGAGCCCCTGGG
CGCCGGCCCCGGGGAGGCCGCGTCGGAAGCGCCTGTGGAGCAGCAGAGCGAGGAGGCGGA
CGGCCCCTCGGATGCGGACGGGGAGGGCCCGGCCGAGAAGAAGTCCTCGGAGAAGAGCGA
CGACGACAAGAAGCCAAAGACAGACGCCCCCCGGAGCACGGCCAGCAAGGCGGACAAGAG
GAAGAAGGTGTGCGGCGTGTGCAGCAAGAGGTTCTGGTCCCTGCAGGACCTGACCCGGCA
CATGAGGTCGCACACAGGCGAGAGGCCGTACAAGTGTCAGACCTGCGAGCGAACCTTCAC
CTTGAAGCACAGCCTGGTTCGCCACCAGCGGGTCCACCAGAAAGCCCGGCACGCCAGACA
CCACGGGAAGGACAGCGACAAGGAGCGGGGCGAGGAGGACAGCGAGAGCGAGTCCACCCA
CAGCGGCAACAACCCCGTGTCGGAGAACGAGGCGGACTCGGCCCTGCTCGCCAGCAACCA
CGTGGCCGTCACGCGGAGCCGGAAGGAGAGCCTGGCCTCCAAGGACGCCGGCCGCCAGGA
GAAGAGGGCGGCAGGCCGGACGGCGGGTGGCGGCGGCCAGGCCGCCGAGGGCAGCCCGGA
GGAGCAGGCGTCTCAGGGTGAGCCTGACCGGGAGAGCCCCGCGGCCCCGGCGCAGGACCT
GCCGGCGCTGCCCGGCAAGAGGCCCGCCCACCCCATCCTGGCCGCCGAAGGCGCCGCGCT
CCTGGGCATGGAGTGACGGCCGGCCTGCCCCCCAGCACACAGACGAAAGCCAGCAGAGCA
CCTTGTCCGGGGGCTCCCTCCGCGAGGTATCCCGGTGCCCTTCAGCTGTCGGGGGCAGCG
GAGGGAGGGAGCCAGGCGGGCCTCGCTCGGTGCCATAGCCTTACAGACCCGTGCGGGGAT
GGACCACGCGGGACCCGAGTGCCTAACTACTACAGCCCTCTGGAGTCGTCCCGGGGGTTG
TGTTTCCCACAAGGACTTTTTAAAAAAAAACAAAGCAAGTATTTTAAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-448, gnl|bosTau2|chr23 (34951165-34950727)
               

               
               1-448, gnl|Hg17|chr6 (7192023-7192465)
               

               
               1-448, gnl|Mm7|chr13 (37365974-37366420)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-448, gnl|bosTau2|chr23 (34951165-34950727)
               

               
               1-448, gnl|Hg17|chr6 (7192023-7192465)
               

               
               1-448, gnl|Mm7|chr13 (37365974-37366420)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-448, gnl\|bosTau2\|chr23 (34951165-34950727)
	1-448, gnl\|Hg17\|chr6 (7192023-7192465)
	1-448, gnl\|Mm7\|chr13 (37365974-37366420)