Non-Coding RNA Search

Ss1.1-Mixn-0008b15.5

Sequence:


               
               GCACCAGCTGGAGCGGGAGATCCTTCAGGTGGGCGAAATGATCCAGGACATGGAGATGAA
AGTCAACGTGCCCCGCTGGACCGTGCAGGCCCGGCAGGTGGCGGGCGCCGAGCTCCTCTC
TAGCGCTAGCGCGGGCGTGTCCTCTGTGGGCGGCGTGTCCGTAGAACAACGCACCGGGCC
CTGCGACCTGAGCAAGGCCCTGGCTGCCACCATCTTCAGCGCCGTGCTGCTGGCGGCTGT
GGCCTTGGCCGTGTGCGTGGCGAAGCTGAGCTGACCTGCACCCGACGGCCCCCCGAAGCT
ACCGCTCCCTCCCTGGAGGCACCCCTCCAAGAACAACTGCGACTGCTAGGACTAGGGGTG
GGAGTGGGATGTGGCATGTTTCAGGAGAGCTGTTCTCGTGCCTATACGTGTAGGTATAGG
CACGTTTCAAGCACACATTTGCTAGGACAGAACATGGCTTCCTCTTGCTGGCCAGGGAAG
AGTTAATTTTGCGCGGGCCAGCAGGGCATTATCGCTAATGTATGCAGGAGCTTTATCCTC
TATTAATAGAAAACCGTCCACAGTGACCCGAGATTCCTCCAAGTTAATAGGTTACCGCCT
GTGCTGCTGGGGCGTGTTTACACTGAATCTGGGCTTGGTCCTCTCGCCCCTGTCAGTGAT
CCCATTCTCTGAGTGGGGCAGTTTGGGGGGAAAAAAAGGGTGAGGTGAAATGAAGTGTTG
AGAAGGTGGCTATTTTGGTGTGTGTGGGTGTGTGGATGTGTGTGTGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCAGCTGGAGCGGGAGATCCTTCAGGTGGGCGAAATGATCCAGGACATGGAGATGAA
AGTCAACGTGCCCCGCTGGACCGTGCAGGCCCGGCAGGTGGCGGGCGCCGAGCTCCTCTC
TAGCGCTAGCGCGGGCGTGTCCTCTGTGGGCGGCGTGTCCGTAGAACAACGCACCGGGCC
CTGCGACCTGAGCAAGGCCCTGGCTGCCACCATCTTCAGCGCCGTGCTGCTGGCGGCTGT
GGCCTTGGCCGTGTGCGTGGCGAAGCTGAGCTGACCTGCACCCGACGGCCCCCCGAAGCT
ACCGCTCCCTCCCTGGAGGCACCCCTCCAAGAACAACTGCGACTGCTAGGACTAGGGGTG
GGAGTGGGATGTGGCATGTTTCAGGAGAGCTGTTCTCGTGCCTATACGTGTAGGTATAGG
CACGTTTCAAGCACACATTTGCTAGGACAGAACATGGCTTCCTCTTGCTGGCCAGGGAAG
AGTTAATTTTGCGCGGGCCAGCAGGGCATTATCGCTAATGTATGCAGGAGCTTTATCCTC
TATTAATAGAAAACCGTCCACAGTGACCCGAGATTCCTCCAAGTTAATAGGTTACCGCCT
GTGCTGCTGGGGCGTGTTTACACTGAATCTGGGCTTGGTCCTCTCGCCCCTGTCAGTGAT
CCCATTCTCTGAGTGGGGCAGTTTGGGGGGAAAAAAAGGGTGAGGTGAAATGAAGTGTTG
AGAAGGTGGCTATTTTGGTGTGTGTGGGTGTGTGGATGTGTGTGTGCG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-761, gnl|bosTau2|chr18 (35395097-35394333)
               

               
               1-761, gnl|Hg17|chr19 (37859450-37860168)
               

               
               1-761, gnl|Mm7|chr7 (32477806-32477116)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-761, gnl|bosTau2|chr18 (35395097-35394333)
               

               
               1-761, gnl|Hg17|chr19 (37859450-37860168)
               

               
               1-761, gnl|Mm7|chr7 (32477806-32477116)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	1-761, gnl\|bosTau2\|chr18 (35395097-35394333)
	1-761, gnl\|Hg17\|chr19 (37859450-37860168)
	1-761, gnl\|Mm7\|chr7 (32477806-32477116)