Non-Coding RNA Search

Ss1.1-Mixn-0009b19.5

Sequence:


               
               GCCAGTGGGATGGGCAACTACCATGGCAAGTTCTCCTTCGACACTTTTTCCCACCACCGC
ACCTGCCTGTTGCGCATTCCTGGGCTGGAGAAGATCTACGCCATCCGGTACCCACCCCAT
TCTCCACGCAACCTGAGGGTGCTGCTGACGGCCATGGAGACCCGCAGCTGCAGCTGCACC
CTGCTGTGAGCCGGCTTCAGGCACCGGAGGATCCAGCACCCCTTCCAGCTCACCTGAGTC
CTCTGCAGCCACGGCCACCTGGGGCTGGAGGAGATATGACTGGGGTCCTCGGCACAGGAG
GAAAAGGCCGGGGCCAGTGCTTGCCCTCCTCTCTCCTGGGGTTTCTCTCTTTGAGAAGAT
GTCCCCCAGCTAGGATGGGTCACGGTGCAGGAGTATGGGAACCAGTGCAGTAACCTGGCT
GCCTCCTCCCACCCTGGCCACCTGTGTCCCCGGAGAGGAGGGTAGATGTGGGCACCTCTT
GGCCACCACCCTTTCTGTGGCGGGTGCAAAACGGGCCCTGGCATCTGGCCCATGTCACGC
TGTGGACGGGCTGTGACCGGGGTCATCCCTGCCCTCTCTGAGCCTGTCTCCCTGTCTGTG
TACAGAGGAGGTAGCGAACAGCACCTCCAGACAGCACTGTGAGGATTAAATCTCGGAGCT
GAATCGCTGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAGTGGGATGGGCAACTACCATGGCAAGTTCTCCTTCGACACTTTTTCCCACCACCGC
ACCTGCCTGTTGCGCATTCCTGGGCTGGAGAAGATCTACGCCATCCGGTACCCACCCCAT
TCTCCACGCAACCTGAGGGTGCTGCTGACGGCCATGGAGACCCGCAGCTGCAGCTGCACC
CTGCTGTGAGCCGGCTTCAGGCACCGGAGGATCCAGCACCCCTTCCAGCTCACCTGAGTC
CTCTGCAGCCACGGCCACCTGGGGCTGGAGGAGATATGACTGGGGTCCTCGGCACAGGAG
GAAAAGGCCGGGGCCAGTGCTTGCCCTCCTCTCTCCTGGGGTTTCTCTCTTTGAGAAGAT
GTCCCCCAGCTAGGATGGGTCACGGTGCAGGAGTATGGGAACCAGTGCAGTAACCTGGCT
GCCTCCTCCCACCCTGGCCACCTGTGTCCCCGGAGAGGAGGGTAGATGTGGGCACCTCTT
GGCCACCACCCTTTCTGTGGCGGGTGCAAAACGGGCCCTGGCATCTGGCCCATGTCACGC
TGTGGACGGGCTGTGACCGGGGTCATCCCTGCCCTCTCTGAGCCTGTCTCCCTGTCTGTG
TACAGAGGAGGTAGCGAACAGCACCTCCAGACAGCACTGTGAGGATTAAATCTCGGAGCT
GAATCGCTGACT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               3-672, gnl|bosTau2|chr29 (39507953-39507262)
               

               
               3-672, gnl|Hg17|chr11 (67551797-67552798)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-672, gnl|bosTau2|chr29 (39507953-39507262)
               

               
               3-672, gnl|Hg17|chr11 (67551797-67552798)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cly (0.120642)
               

               
               clu (0.119646)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)
               

               
               clu (0.119646)
               

               
               ebs (0.118301)

	3-672, gnl\|bosTau2\|chr29 (39507953-39507262)
	3-672, gnl\|Hg17\|chr11 (67551797-67552798)