Ss1.1-Mixn-0009c11.5
|
TGGCGGCGTTGGGGGAACCTGTGCGACTGGAGAGGGATATTTGTAGAGCAATTGAATTGT
TGGAAAAATTACAGAGGAGTGGAGAGGTACCACCACAGAAACTTCAGGCTTTACAAAGAG
TCCTTCAGAGTGAATTCTGCAATGCTGTAAGAGAGGTATATGAACACGTCTATGAGACTG
TGGACATCAGTAGCAGTCCTGAAGTGAGAGCTAATGCAACTGCAAAGGCTACTGTTGCTG
CATTTGCTGCCAGCGAAGGACATTCTCATCCTCGAGTTGTTGAGCTACCAAAAACAGAGG
AAGGCCTTGGATTCAATATTATGGGAGGCAAAGAACAAAACTCACCAATCTATATATCTC
GAATAATCCCAGGTGGAATTGCTGATAGACATGGAGGTCTCAAGCGAGGAGATCAACTCC
TTTCTGTCAATGGAGTGAGCGTCGAAGGGGAACATCATGAGAAAGCTGTAGAACTGCTGA
AGGCAGCTCAAGGAAAAGTGAAATTAGTAGTACGATACACACCCAAGGTCTTAGAAGAAA
TGGAGTCACGCTTTGAAAAAATGAGATCAGCAAAACGTAGGCAACAGACTTAATGCAGTT
AAAAACTTGATATTTCATTTTGCTTTTAGCTAGAGAAGTTTTACTTGTGACCTACTGATG
GCCGCAATGCCAATGATTGTAAAAAAAAACAAACTTCCCTTGAAATCCTCCTTGCCATTT
TATAAATACCTATTTTAACATCATTTATGCTTCCCAAGATGCGTACACTTTTTTCTGACA
AAAAAAAAGTAAAAAGGTGATGAGGGCAATTCTGTCCTGCTGTTTTTACAGGCCTTTTTC
AACAAATGCAGATTTTGTCATAAAGTTGTTATAGATTTTTAAAAATGCTTTTTTAATATT
AAAATGTACTTTTACATTCTTAATCTTTTTTTAGGGAAAAAGATTTTCTTTATTTGGCCG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGCGGCGTTGGGGGAACCTGTGCGACTGGAGAGGGATATTTGTAGAGCAATTGAATTGT
TGGAAAAATTACAGAGGAGTGGAGAGGTACCACCACAGAAACTTCAGGCTTTACAAAGAG
TCCTTCAGAGTGAATTCTGCAATGCTGTAAGAGAGGTATATGAACACGTCTATGAGACTG
TGGACATCAGTAGCAGTCCTGAAGTGAGAGCTAATGCAACTGCAAAGGCTACTGTTGCTG
CATTTGCTGCCAGCGAAGGACATTCTCATCCTCGAGTTGTTGAGCTACCAAAAACAGAGG
AAGGCCTTGGATTCAATATTATGGGAGGCAAAGAACAAAACTCACCAATCTATATATCTC
GAATAATCCCAGGTGGAATTGCTGATAGACATGGAGGTCTCAAGCGAGGAGATCAACTCC
TTTCTGTCAATGGAGTGAGCGTCGAAGGGGAACATCATGAGAAAGCTGTAGAACTGCTGA
AGGCAGCTCAAGGAAAAGTGAAATTAGTAGTACGATACACACCCAAGGTCTTAGAAGAAA
TGGAGTCACGCTTTGAAAAAATGAGATCAGCAAAACGTAGGCAACAGACTTAATGCAGTT
AAAAACTTGATATTTCATTTTGCTTTTAGCTAGAGAAGTTTTACTTGTGACCTACTGATG
GCCGCAATGCCAATGATTGTAAAAAAAAACAAACTTCCCTTGAAATCCTCCTTGCCATTT
TATAAATACCTATTTTAACATCATTTATGCTTCCCAAGATGCGTACACTTTTTTCTGACA
AAAAAAAAGTAAAAAGGTGATGAGGGCAATTCTGTCCTGCTGTTTTTACAGGCCTTTTTC
AACAAATGCAGATTTTGTCATAAAGTTGTTATAGATTTTTAAAAATGCTTTTTTAATATT
AAAATGTACTTTTACATTCTTAATCTTTTTTTAGGGAAAAAGATTTTCTTTATTTGGCCG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3' of BC053907, + |
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5' of NM_018362, + |
Human gene identifier and UTR site,
human gene reading direction
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3' of BC053907, + |
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5' of NM_018362, + |
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36-158, gnl|bosTau2|chr15 (36474952-36475074) |
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36-158, gnl|canFam2|chr21 (51262473-51262600) |
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36-158, gnl|danRer3|chr7 (22070056-22070187) |
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36-158, gnl|dasNov1|scaffold_176596 (3480-3606) |
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36-158, gnl|echTel1|scaffold_169079 (460-587) |
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36-158, gnl|fr1|chrUn (226350445-226350565) |
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36-158, gnl|galGal2|chr3 (44810294-44810167) |
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36-158, gnl|hg17|chr11 (27479914-27480041) |
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36-158, gnl|Hg17|chr11 (27480044-27479922) |
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36-158, gnl|loxAfr1|scaffold_40076 (5737-5864) |
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36-158, gnl|mm7|chr2 (109745383-109745256) |
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36-158, gnl|Mm7|chr2 (109745251-109745373) |
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36-158, gnl|monDom2|scaffold_10 (72909687-72909814) |
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36-158, gnl|oryCun1|scaffold_212415 (49590-49460) |
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36-158, gnl|panTro1|chr9 (27777720-27777847) |
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36-158, gnl|rheMac2|chr14 (44303282-44303155) |
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36-158, gnl|rn3|chr3 (95227955-95227828) |
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36-158, gnl|tetNig1|chrUn_random (102072685-102072565) |
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36-158, gnl|xenTro1|scaffold_4 (1320938-1321065) |
| |
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437-956, gnl|bosTau2|chr15 (36478393-36478915) |
|
437-956, gnl|Hg17|chr11 (27476928-27476406) |
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437-956, gnl|Mm7|chr2 (109748032-109748539) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
36-158, gnl|bosTau2|chr15 (36474952-36475074) |
|
36-158, gnl|canFam2|chr21 (51262473-51262600) |
|
36-158, gnl|danRer3|chr7 (22070056-22070187) |
|
36-158, gnl|dasNov1|scaffold_176596 (3480-3606) |
|
36-158, gnl|echTel1|scaffold_169079 (460-587) |
|
36-158, gnl|fr1|chrUn (226350445-226350565) |
|
36-158, gnl|galGal2|chr3 (44810294-44810167) |
|
36-158, gnl|hg17|chr11 (27479914-27480041) |
|
36-158, gnl|Hg17|chr11 (27480044-27479922) |
|
36-158, gnl|loxAfr1|scaffold_40076 (5737-5864) |
|
36-158, gnl|mm7|chr2 (109745383-109745256) |
|
36-158, gnl|Mm7|chr2 (109745251-109745373) |
|
36-158, gnl|monDom2|scaffold_10 (72909687-72909814) |
|
36-158, gnl|oryCun1|scaffold_212415 (49590-49460) |
|
36-158, gnl|panTro1|chr9 (27777720-27777847) |
|
36-158, gnl|rheMac2|chr14 (44303282-44303155) |
|
36-158, gnl|rn3|chr3 (95227955-95227828) |
|
36-158, gnl|tetNig1|chrUn_random (102072685-102072565) |
|
36-158, gnl|xenTro1|scaffold_4 (1320938-1321065) |
| |
|
437-956, gnl|bosTau2|chr15 (36478393-36478915) |
|
437-956, gnl|Hg17|chr11 (27476928-27476406) |
|
437-956, gnl|Mm7|chr2 (109748032-109748539) |
|
nms (0.213858) |
|
spl (0.143184) |
|
pty (0.142714) |
|
pla (0.133672) |
|
nms (0.213858) |
|
spl (0.143184) |
|
pty (0.142714) |
|
pla (0.133672) |
