Non-Coding RNA Search

Ss1.1-Mixn-0009g11.5

Sequence:


               
               CTGATTTGCCCTTTTTTCTTATTGTGTTACATTCAGTGACTCTACCATTTTTCTAGGTCC
ATAATATGAAATTGCATGTTAACTCAATGCACCCTGACTAAAACATTGGCAGTGCTTATA
AGCAAACCTAAAGCATTTATCCACTTTATTTTCAACTCCTGCTATCTTCTTAAGCCTTCT
TTAAATATTTATAATAGTAATTAACTATATCATAGTTATATATAATATCTGTATTATTTT
TCAGCCATATATATCTAAGCATTTACAATCAGGGTAAAACATTTGGCATATGCAACAGTT
CATTTCCCTAACAGAGATTTAAAGAAGTTTACTGTCCTTCAACTTTAGACAAAATACATT
CTAGCCATAGGATTTAACCTGTCTTCTTCAAAGAGTCCCCCAATACTCTTAATTTTTACA
CAATATTCATTCTACTTTGCTCTGACTATAAAAGTACTGAATCTGTCCAAAGAAGAAATC
TTGCTGCTGAGAGCAGAGCTGTATTTGGAAGTAAATGTAATATACTTATCACATCAGACT
CAAGTGAAATTTTATTTGGTCATTTTAATGTTAGGATTTTCCATATCAAATGCCTTCTTG
GGCATTTCCAGCGTATGAAATAAGGTATACTGGCATGGCCTGTCTACCCAATGCCATTGT
TGGACTTGCAATTGGTTCTCTCCACTGTATTCCAAAATTTAGTTATGGAAAAGCACAGCC
GTGTTAACTAAATATCTCATAGTCCTATGGCAGACACTNGGAGCTTATTTCTAAACTTCT
GCATGTTACACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGATTTGCCCTTTTTTCTTATTGTGTTACATTCAGTGACTCTACCATTTTTCTAGGTCC
ATAATATGAAATTGCATGTTAACTCAATGCACCCTGACTAAAACATTGGCAGTGCTTATA
AGCAAACCTAAAGCATTTATCCACTTTATTTTCAACTCCTGCTATCTTCTTAAGCCTTCT
TTAAATATTTATAATAGTAATTAACTATATCATAGTTATATATAATATCTGTATTATTTT
TCAGCCATATATATCTAAGCATTTACAATCAGGGTAAAACATTTGGCATATGCAACAGTT
CATTTCCCTAACAGAGATTTAAAGAAGTTTACTGTCCTTCAACTTTAGACAAAATACATT
CTAGCCATAGGATTTAACCTGTCTTCTTCAAAGAGTCCCCCAATACTCTTAATTTTTACA
CAATATTCATTCTACTTTGCTCTGACTATAAAAGTACTGAATCTGTCCAAAGAAGAAATC
TTGCTGCTGAGAGCAGAGCTGTATTTGGAAGTAAATGTAATATACTTATCACATCAGACT
CAAGTGAAATTTTATTTGGTCATTTTAATGTTAGGATTTTCCATATCAAATGCCTTCTTG
GGCATTTCCAGCGTATGAAATAAGGTATACTGGCATGGCCTGTCTACCCAATGCCATTGT
TGGACTTGCAATTGGTTCTCTCCACTGTATTCCAAAATTTAGTTATGGAAAAGCACAGCC
GTGTTAACTAAATATCTCATAGTCCTATGGCAGACACTNGGAGCTTATTTCTAAACTTCT
GCATGTTACACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-788, gnl|bosTau2|chr4 (33204561-33203784)
               

               
               1-788, gnl|Hg17|chr7 (35014150-35013339)
               

               
               1-788, gnl|Mm7|chr9 (24608292-24607334)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-788, gnl|bosTau2|chr4 (33204561-33203784)
               

               
               1-788, gnl|Hg17|chr7 (35014150-35013339)
               

               
               1-788, gnl|Mm7|chr9 (24608292-24607334)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               ret (0.128733)

	1-788, gnl\|bosTau2\|chr4 (33204561-33203784)
	1-788, gnl\|Hg17\|chr7 (35014150-35013339)
	1-788, gnl\|Mm7\|chr9 (24608292-24607334)