Non-Coding RNA Search

Ss1.1-Mixn-0009m03.5

Sequence:


               
               CACTATGGCGGCCGGAGCTGGCAAGGTCGGAAAGTTTCTGTCGTCGGGCAGAGCCTGAGC
TTGTCCCACCGGCTGCGAGCGGTGGAGGCTGCGGCGGACCCAACCCGGGGCCTCCAGGCC
TCTCCCCCAACCTCCGGGCCAGCCTCCCTCCCCCACCTCCTCGTCCGTCGGGAGCTTCAG
CTGCGGTCCCTGAGATGCGACCCTCGCGGGAGAGACTCTGAAAGGAGGTGGCCGGTGTGC
TGAGGAGCAGCCAGGAGCCCAGGAGTCCAGGGACCAACTTCCTGCGGGCCGAGACCCCGG
ATCCTCCCCGGGGTCGCGCCTCGCTCGGTCACCACCCGCCTGCTGAGCCGGATCCCCGCC
CTGGTCGCGGGGACGCCCGCCAGGTGCCCGGAGTCCCGCCTTGGCCGCTGCCCTAGCTCC
CGCCGGTCCCCGTTCCTCGTGCCAGGGACTCCAGCCACCGCCACCTCGTCTCGTGCGGGG
CCGGGGACCCTGTGCCACCTCCCGGCCGGCCTTCGCGGGAGGGGCAATGCAGACTGTCCG
GCTGGCCGTCTAGACCCCTGCGCTGGCCCCATCGCCTCTCGTCCCTCCAGTCCGGAGGCC
CTCGAAGACGGGCGGTGGCTGCCCAGAGGTGCTCAGCTACACCTTTCTTCCGCCTGAAAG
GACCTTTCTGGCCGCAACGAACCCGACCTTCCTTCATGCTGCAGTGCTGCAACATTTCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTATGGCGGCCGGAGCTGGCAAGGTCGGAAAGTTTCTGTCGTCGGGCAGAGCCTGAGC
TTGTCCCACCGGCTGCGAGCGGTGGAGGCTGCGGCGGACCCAACCCGGGGCCTCCAGGCC
TCTCCCCCAACCTCCGGGCCAGCCTCCCTCCCCCACCTCCTCGTCCGTCGGGAGCTTCAG
CTGCGGTCCCTGAGATGCGACCCTCGCGGGAGAGACTCTGAAAGGAGGTGGCCGGTGTGC
TGAGGAGCAGCCAGGAGCCCAGGAGTCCAGGGACCAACTTCCTGCGGGCCGAGACCCCGG
ATCCTCCCCGGGGTCGCGCCTCGCTCGGTCACCACCCGCCTGCTGAGCCGGATCCCCGCC
CTGGTCGCGGGGACGCCCGCCAGGTGCCCGGAGTCCCGCCTTGGCCGCTGCCCTAGCTCC
CGCCGGTCCCCGTTCCTCGTGCCAGGGACTCCAGCCACCGCCACCTCGTCTCGTGCGGGG
CCGGGGACCCTGTGCCACCTCCCGGCCGGCCTTCGCGGGAGGGGCAATGCAGACTGTCCG
GCTGGCCGTCTAGACCCCTGCGCTGGCCCCATCGCCTCTCGTCCCTCCAGTCCGGAGGCC
CTCGAAGACGGGCGGTGGCTGCCCAGAGGTGCTCAGCTACACCTTTCTTCCGCCTGAAAG
GACCTTTCTGGCCGCAACGAACCCGACCTTCCTTCATGCTGCAGTGCTGCAACATTTCCG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               24-720, gnl|bosTau2|chr22 (31487375-31488073)
               

               
               24-720, gnl|Hg17|chr3 (57717313-57718005)
               

               
               24-720, gnl|Mm7|chr14 (23925393-23924705)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-720, gnl|bosTau2|chr22 (31487375-31488073)
               

               
               24-720, gnl|Hg17|chr3 (57717313-57718005)
               

               
               24-720, gnl|Mm7|chr14 (23925393-23924705)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.401016)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.401016)

	24-720, gnl\|bosTau2\|chr22 (31487375-31488073)
	24-720, gnl\|Hg17\|chr3 (57717313-57718005)
	24-720, gnl\|Mm7\|chr14 (23925393-23924705)