Non-Coding RNA Search

Ss1.1-Mixn-0010f22.5

Sequence:


               
               CAGGCGGAGAGCTGGCGGGCGGGCGGGGCAGGGTTCGGCGGCGCCTGGCGAGGACCAAAG
TGCGTCTGCAGACCAGGCAAAACCCAATTGAGTTGGACAGCCATGCCCAGGTACTGCCGG
GCTCCGAACTGCTCCAACACTGCGGGCCGATTGGGCGCAGATCACCGCCCGGTGAGCTTC
TACAAGTTCCCACTGAAGGACGGCCCCAGGCTGCAGGCCTGGCTGAGGCACATGGGCCTT
GAGCACTGGGTGCCCAGCTGCCACCAGCACCTGTGCAGCGAGCACTTCGCCCCCTCCTGC
TTCCAGTGGCGCTGGGGGGTGCGCTACCTGCGGCCAGATGCTGTGCCCTCCATCTTCTCC
CCGGCGACGTTCACCGAGAGGCAAGAGAATTGCGGAAGCACCGAGAAACCAGTCATGCCT
CCGCCTCCGCCGGAGGCCACGTCCCTGTTCCCTGGCTCAGCCGGCCCGGCCCCGGGCCCC
GTCCGCCTGGTGGTGCTGGGGCCAGCATCCGGAGGCCCCGAGGCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGCGGAGAGCTGGCGGGCGGGCGGGGCAGGGTTCGGCGGCGCCTGGCGAGGACCAAAG
TGCGTCTGCAGACCAGGCAAAACCCAATTGAGTTGGACAGCCATGCCCAGGTACTGCCGG
GCTCCGAACTGCTCCAACACTGCGGGCCGATTGGGCGCAGATCACCGCCCGGTGAGCTTC
TACAAGTTCCCACTGAAGGACGGCCCCAGGCTGCAGGCCTGGCTGAGGCACATGGGCCTT
GAGCACTGGGTGCCCAGCTGCCACCAGCACCTGTGCAGCGAGCACTTCGCCCCCTCCTGC
TTCCAGTGGCGCTGGGGGGTGCGCTACCTGCGGCCAGATGCTGTGCCCTCCATCTTCTCC
CCGGCGACGTTCACCGAGAGGCAAGAGAATTGCGGAAGCACCGAGAAACCAGTCATGCCT
CCGCCTCCGCCGGAGGCCACGTCCCTGTTCCCTGGCTCAGCCGGCCCGGCCCCGGGCCCC
GTCCGCCTGGTGGTGCTGGGGCCAGCATCCGGAGGCCCCGAGGCCCCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61847740|ref|XP_617470.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61847740|ref|XP_617470.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               183-378, gnl|bosTau2|chr18 (41824235-41824040)
               

               
               183-378, gnl|Hg17|chr19 (41222881-41222686)
               

               
               183-378, gnl|Mm7|chr7 (27230608-27230802)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               183-378, gnl|bosTau2|chr18 (41824235-41824040)
               

               
               183-378, gnl|Hg17|chr19 (41222881-41222686)
               

               
               183-378, gnl|Mm7|chr7 (27230608-27230802)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mas (0.210305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	183-378, gnl\|bosTau2\|chr18 (41824235-41824040)
	183-378, gnl\|Hg17\|chr19 (41222881-41222686)
	183-378, gnl\|Mm7\|chr7 (27230608-27230802)