Non-Coding RNA Search

Ss1.1-Mixn-0010i05.5

Sequence:


               
               TCTCCCTGACCCGCGTCTCCGACGGCGAAAATGTCATCATAACCCACTTCGCCGCCAGGG
AGGAGCTCATCCAGGCCAACGTCTGCAGCACCTTCATTCCCGTGTACTGCGGCCTCATTC
CACCTGCTCTCCAGGGCGAGCGCTACGTGGACGGTGGCATCTCAGACAACCTGCCTCTCT
ACGAACTCAAGAGCACCATCACCGTGTCCCCCTTCTCGGGCGAGAGCGACATCTGCCCGC
AGGACAGCTCCACCAACATCCACGAGCTCCGCGTCACCAACACCAGCATCCAGTTCAGCC
TGCGCAACCTCTACCGCCTCTCCAAGGCCCTGTTCCCGCCCGAGCCCCTGGTGCTTCGAG
AGATGTGCAAGCAGGGTTACAGGGACGGCCTGCGCTTCCTGCGGCGGAACGGCCTCCTGA
ACCGGCCCAACCCCTTGCTGGCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCCCTGACCCGCGTCTCCGACGGCGAAAATGTCATCATAACCCACTTCGCCGCCAGGG
AGGAGCTCATCCAGGCCAACGTCTGCAGCACCTTCATTCCCGTGTACTGCGGCCTCATTC
CACCTGCTCTCCAGGGCGAGCGCTACGTGGACGGTGGCATCTCAGACAACCTGCCTCTCT
ACGAACTCAAGAGCACCATCACCGTGTCCCCCTTCTCGGGCGAGAGCGACATCTGCCCGC
AGGACAGCTCCACCAACATCCACGAGCTCCGCGTCACCAACACCAGCATCCAGTTCAGCC
TGCGCAACCTCTACCGCCTCTCCAAGGCCCTGTTCCCGCCCGAGCCCCTGGTGCTTCGAG
AGATGTGCAAGCAGGGTTACAGGGACGGCCTGCGCTTCCTGCGGCGGAACGGCCTCCTGA
ACCGGCCCAACCCCTTGCTGGCGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               139-353, gnl|bosTau2|chr29 (44818114-44818328)
               

               
               139-353, gnl|Hg17|chr11 (812395-812609)
               

               
               139-353, gnl|Mm7|chr7 (137875267-137875481)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               139-353, gnl|bosTau2|chr29 (44818114-44818328)
               

               
               139-353, gnl|Hg17|chr11 (812395-812609)
               

               
               139-353, gnl|Mm7|chr7 (137875267-137875481)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	139-353, gnl\|bosTau2\|chr29 (44818114-44818328)
	139-353, gnl\|Hg17\|chr11 (812395-812609)
	139-353, gnl\|Mm7\|chr7 (137875267-137875481)