Ss1.1-Mixn-0010o16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACAACTGGATGAGAAAGATGCTTTGGTCTCTCAGCTTTCAAGGACTAAACAAGCATCTA CTCAGCAGATTGAGGAGCTGAAACGTCAGCTAGAGGAAGAAACTAAAGCCAAGAACGCCC TGGCCCACGCCCTGCAGTCCTCCCGCCACGACTGCGACCTGCTGCGGGAACAGTATGAGG AGGAGCAGGAAGCCAAGGCCGAGCTGCAGAGGGCGCTGTCCAAGGCCAACAGCGAGGTTG CCCAGTGGAGGACCAAGTACGAGACGGACGCCATTCAGCGCACCGAGGAGCTGGAGGAGG CCAAGAAGAAGCTAGCCCAGCGTCTGCAGGAAGCTGAGGAACATGTAGAAGCCGTGAATG CCAAGTGCGCCTCCCTTGAGAAGACTAAGCAGCGGCTCCAGAATGAGGTCGAGGACCTCA TGCTCGATGTGGAGAGGTCCAATGCTGCCTGCACGGCTCTGGATAAGAAGCAGAGGAACT TTGACAAGGTCCTATCAGAATGGAAACAGAAGTACGAGGAAACTCAGGCTGAACTTGAGG CCTCCCAGAAGGAGTCCCGTTCACTCAGCACTGAGCTGTTCAAGGTCAAGAATGCCTACG AGGAATCCCTGGACCAACTTGAAACGCTAAAGAGGGAAAATAAGAACTTGCAGCAGGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACAACTGGATGAGAAAGATGCTTTGGTCTCTCAGCTTTCAAGGACTAAACAAGCATCTA CTCAGCAGATTGAGGAGCTGAAACGTCAGCTAGAGGAAGAAACTAAAGCCAAGAACGCCC TGGCCCACGCCCTGCAGTCCTCCCGCCACGACTGCGACCTGCTGCGGGAACAGTATGAGG AGGAGCAGGAAGCCAAGGCCGAGCTGCAGAGGGCGCTGTCCAAGGCCAACAGCGAGGTTG CCCAGTGGAGGACCAAGTACGAGACGGACGCCATTCAGCGCACCGAGGAGCTGGAGGAGG CCAAGAAGAAGCTAGCCCAGCGTCTGCAGGAAGCTGAGGAACATGTAGAAGCCGTGAATG CCAAGTGCGCCTCCCTTGAGAAGACTAAGCAGCGGCTCCAGAATGAGGTCGAGGACCTCA TGCTCGATGTGGAGAGGTCCAATGCTGCCTGCACGGCTCTGGATAAGAAGCAGAGGAACT TTGACAAGGTCCTATCAGAATGGAAACAGAAGTACGAGGAAACTCAGGCTGAACTTGAGG CCTCCCAGAAGGAGTCCCGTTCACTCAGCACTGAGCTGTTCAAGGTCAAGAATGCCTACG AGGAATCCCTGGACCAACTTGAAACGCTAAAGAGGGAAAATAAGAACTTGCAGCAGGAGA |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 108-305, gnl|bosTau2|chr19 (22477242-22477045) | |
| 108-305, gnl|canFam2|chr5 (37697691-37697897) | |
| 108-305, gnl|danRer3|chr5 (27958834-27958633) | |
| 108-305, gnl|dasNov1|scaffold_25150 (38488-38282) | |
| 108-305, gnl|echTel1|scaffold_279324 (12891-13097) | |
| 108-305, gnl|fr1|chrUn (258625392-258625592) | |
| 108-305, gnl|galGal2|chr18 (340994-341200) | |
| 108-305, gnl|hg17|chr17 (10242480-10242686) | |
| 108-305, gnl|Hg17|chr17 (10242682-10242485) | |
| 108-305, gnl|loxAfr1|scaffold_121 (161641-161434) | |
| 108-305, gnl|mm7|chr11 (67381725-67381519) | |
| 108-305, gnl|Mm7|chr11 (67381521-67381718) | |
| 108-305, gnl|monDom2|scaffold_18 (3136612-3136406) | |
| 108-305, gnl|oryCun1|scaffold_208583 (44475-44269) | |
| 108-305, gnl|panTro1|chr19_random (28177733-28177527) | |
| 108-305, gnl|rheMac2|chr16 (10155640-10155846) | |
| 108-305, gnl|rn3|chr10 (54007444-54007239) | |
| 108-305, gnl|tetNig1|chrUn_random (96887336-96887134) | |
| 108-305, gnl|xenTro1|scaffold_270 (212884-212678) | |
| 487-659, gnl|bosTau2|chr19 (22522756-22522584) | |
| 487-659, gnl|Hg17|chr17 (10292827-10292655) | |
| 487-659, gnl|Mm7|chr11 (67337132-67337304) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 108-305, gnl|bosTau2|chr19 (22477242-22477045) | |
| 108-305, gnl|canFam2|chr5 (37697691-37697897) | |
| 108-305, gnl|danRer3|chr5 (27958834-27958633) | |
| 108-305, gnl|dasNov1|scaffold_25150 (38488-38282) | |
| 108-305, gnl|echTel1|scaffold_279324 (12891-13097) | |
| 108-305, gnl|fr1|chrUn (258625392-258625592) | |
| 108-305, gnl|galGal2|chr18 (340994-341200) | |
| 108-305, gnl|hg17|chr17 (10242480-10242686) | |
| 108-305, gnl|Hg17|chr17 (10242682-10242485) | |
| 108-305, gnl|loxAfr1|scaffold_121 (161641-161434) | |
| 108-305, gnl|mm7|chr11 (67381725-67381519) | |
| 108-305, gnl|Mm7|chr11 (67381521-67381718) | |
| 108-305, gnl|monDom2|scaffold_18 (3136612-3136406) | |
| 108-305, gnl|oryCun1|scaffold_208583 (44475-44269) | |
| 108-305, gnl|panTro1|chr19_random (28177733-28177527) | |
| 108-305, gnl|rheMac2|chr16 (10155640-10155846) | |
| 108-305, gnl|rn3|chr10 (54007444-54007239) | |
| 108-305, gnl|tetNig1|chrUn_random (96887336-96887134) | |
| 108-305, gnl|xenTro1|scaffold_270 (212884-212678) | |
| 487-659, gnl|bosTau2|chr19 (22522756-22522584) | |
| 487-659, gnl|Hg17|chr17 (10292827-10292655) | |
| 487-659, gnl|Mm7|chr11 (67337132-67337304) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.379507) | |
| nep (0.183925) | |
| eru (0.120048) |