Non-Coding RNA Search

Ss1.1-Mixn-0011h09.5

Sequence:


               
               CCCAAAACCCCTTCTGTCTGTCTTGCATAGAGATAAACAAGCTGGCTGACCTTCGGTTGC
CTGATAGTCAAACAGGTTTGATTGACCCTTGTGTCCTTATGAATTTAATGGAGAAAAAAG
AAAGAAAGAAAGACAAAAAGCGTGCTGCACATCTCTTTGGGAATCACTGCCATGAATGTT
AATAGCATTTCTGTAGCTTCCCACAACAGCCTCTTGTGATAAGAGTGAGCTCTGCACTAC
AGTTCGTTTGAGAAGTGTGATTCTGCTGTGTTTACCACACTTGTGAACTTTTAAACTCCT
TTTTTTTATTTTGTCGCCTGCTTCTTTTTTTTATTATCATTTTTAATAAGGGTGACTGAG
GTTGCAGAGAGATTAATGTGTGCTGAGTCTGCATAGCAATTTCCAGTAGGGTTGCCATGA
TAACAAACATACAGATTTTGTCGAAATGTATCGTAGTTTCCCGAAACCGGCCATCACCCT
TAATGGAAGTGCATGATCACGGACTCCCTTTTGAGTCCTATCTTCCCGGCGAAGAATTTC
TCTATTGGCCGAATCGTCTGTTGTTGTATGAACTCCCTGCAAAATTGTTCTCAAGTCTTA
AACAATTAAGTATGTATTAACTCTCTTCTGGGAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAAAACCCCTTCTGTCTGTCTTGCATAGAGATAAACAAGCTGGCTGACCTTCGGTTGC
CTGATAGTCAAACAGGTTTGATTGACCCTTGTGTCCTTATGAATTTAATGGAGAAAAAAG
AAAGAAAGAAAGACAAAAAGCGTGCTGCACATCTCTTTGGGAATCACTGCCATGAATGTT
AATAGCATTTCTGTAGCTTCCCACAACAGCCTCTTGTGATAAGAGTGAGCTCTGCACTAC
AGTTCGTTTGAGAAGTGTGATTCTGCTGTGTTTACCACACTTGTGAACTTTTAAACTCCT
TTTTTTTATTTTGTCGCCTGCTTCTTTTTTTTATTATCATTTTTAATAAGGGTGACTGAG
GTTGCAGAGAGATTAATGTGTGCTGAGTCTGCATAGCAATTTCCAGTAGGGTTGCCATGA
TAACAAACATACAGATTTTGTCGAAATGTATCGTAGTTTCCCGAAACCGGCCATCACCCT
TAATGGAAGTGCATGATCACGGACTCCCTTTTGAGTCCTATCTTCCCGGCGAAGAATTTC
TCTATTGGCCGAATCGTCTGTTGTTGTATGAACTCCCTGCAAAATTGTTCTCAAGTCTTA
AACAATTAAGTATGTATTAACTCTCTTCTGGGAGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-636, gnl|bosTau2|chr23 (35097404-35096785)
               

               
               1-636, gnl|Hg17|chr6 (17399029-17399664)
               

               
               1-636, gnl|Mm7|chr13 (45910141-45910765)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-636, gnl|bosTau2|chr23 (35097404-35096785)
               

               
               1-636, gnl|Hg17|chr6 (17399029-17399664)
               

               
               1-636, gnl|Mm7|chr13 (45910141-45910765)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-636, gnl\|bosTau2\|chr23 (35097404-35096785)
	1-636, gnl\|Hg17\|chr6 (17399029-17399664)
	1-636, gnl\|Mm7\|chr13 (45910141-45910765)