Non-Coding RNA Search

Ss1.1-Mixn-0013h16.5

Sequence:


               
               GGAAGAGAGAACATAAAGAGATGCTCATTTTACACTAGACCAATATAAAAAAGCATGTGT
GTGTGTGTACACACATTGTTGTACCAAGGTGATTTTTTTTTAGACTCATTTTTGAGATAT
TCTTAAAATGACATTTCTCATGGTTACAATATCTGTTGCCCAACTTTTCTACTCTACTAA
ACTACTTTTCTGTTCTTTGATTTCCAGAAGGTAAAAAGGGCTCAAAATCCTTCTTTATTT
TACCACCTTGGAACTTTTGAATAAAGTGTCAAAACTGCAAATTTGTCTTACCAATCCTCC
TAAATATATTATAGGGCTAAGTTTTCTGTGGTAATGACAACCCCACAGGGGAGTGTTTGC
CCTCCAAGATATATTTGAATTACAAGATAACACAAAACTAAGAGCTACCAAAGAAGTTGC
ATAAAATTCCTTTTTTCATCTCATCTATCATCTTATTCAAAAGTCTACTCAAATATCAAG
GGGTCTGCTTTTATGTAAAAGGTTATTCTGTGACACTGCAGAGCTGTAACAAGGAAAAGG
GCTAAAGTCTGGGTCATGAAGACTAGTAAATACTCTGATAAAACAGGACCTTCTGGTATC
AGTTGATCACTGAAATATGTGATATCATATACGTAAGAGTAGTGCTCACCAAAGACGTTG
GAGCAGTTCTTAGAAGAGAAAGAGTAAGGTGGCAGGAGGTTTTAGTAGATGAAGTTAATG
TAACTTAGGACAGACAGGAAAAGGAAGAGACAGCGAAGGGTGAAAATCAGTAATGATTTC
TAAACGTGGTGATGCTATAAGAAGTATAATTTCCTGCAAGCCAGGAGGGCACTGTAAAGT
TCTTAGGAATTTTAATTATCGTAATTCGAGCAAGAGCATTCTCTAATTTAGTAAAGAAAG
AAAAAAAAAAAAAAAAAGCAAGAAAAAGGAAAAGAACAGAACCAGAAAGAGAGAAACCAC
AAACATTTGTTTATCTGGGGTTGGTTTCTGGTTTGTTTAAGTCACAGTATTTATTCAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGAGAGAACATAAAGAGATGCTCATTTTACACTAGACCAATATAAAAAAGCATGTGT
GTGTGTGTACACACATTGTTGTACCAAGGTGATTTTTTTTTAGACTCATTTTTGAGATAT
TCTTAAAATGACATTTCTCATGGTTACAATATCTGTTGCCCAACTTTTCTACTCTACTAA
ACTACTTTTCTGTTCTTTGATTTCCAGAAGGTAAAAAGGGCTCAAAATCCTTCTTTATTT
TACCACCTTGGAACTTTTGAATAAAGTGTCAAAACTGCAAATTTGTCTTACCAATCCTCC
TAAATATATTATAGGGCTAAGTTTTCTGTGGTAATGACAACCCCACAGGGGAGTGTTTGC
CCTCCAAGATATATTTGAATTACAAGATAACACAAAACTAAGAGCTACCAAAGAAGTTGC
ATAAAATTCCTTTTTTCATCTCATCTATCATCTTATTCAAAAGTCTACTCAAATATCAAG
GGGTCTGCTTTTATGTAAAAGGTTATTCTGTGACACTGCAGAGCTGTAACAAGGAAAAGG
GCTAAAGTCTGGGTCATGAAGACTAGTAAATACTCTGATAAAACAGGACCTTCTGGTATC
AGTTGATCACTGAAATATGTGATATCATATACGTAAGAGTAGTGCTCACCAAAGACGTTG
GAGCAGTTCTTAGAAGAGAAAGAGTAAGGTGGCAGGAGGTTTTAGTAGATGAAGTTAATG
TAACTTAGGACAGACAGGAAAAGGAAGAGACAGCGAAGGGTGAAAATCAGTAATGATTTC
TAAACGTGGTGATGCTATAAGAAGTATAATTTCCTGCAAGCCAGGAGGGCACTGTAAAGT
TCTTAGGAATTTTAATTATCGTAATTCGAGCAAGAGCATTCTCTAATTTAGTAAAGAAAG
AAAAAAAAAAAAAAAAAGCAAGAAAAAGGAAAAGAACAGAACCAGAAAGAGAGAAACCAC
AAACATTTGTTTATCTGGGGTTGGTTTCTGGTTTGTTTAAGTCACAGTATTTATTCAAGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-1020, gnl|bosTau2|chr15 (15130450-15131458)
               

               
               1-1020, gnl|Hg17|chr11 (117773279-117772356)
               

               
               1-1020, gnl|Mm7|chr9 (44859186-44860203)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1020, gnl|bosTau2|chr15 (15130450-15131458)
               

               
               1-1020, gnl|Hg17|chr11 (117773279-117772356)
               

               
               1-1020, gnl|Mm7|chr9 (44859186-44860203)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	1-1020, gnl\|bosTau2\|chr15 (15130450-15131458)
	1-1020, gnl\|Hg17\|chr11 (117773279-117772356)
	1-1020, gnl\|Mm7\|chr9 (44859186-44860203)