Non-Coding RNA Search

Ss1.1-Mixn-0013l15.5

Sequence:


               
               CGCAAAACTTGGGACGCTGCACACACCCGGGTGTCCGGGCTTTGGACCAGGCGCGCCTTT
TGAACTCACGTTCAGTACAATCGTTTCTTTTCCAAGAAGGGTTTTCTTTTTCTTTCTTTC
TTTCTTTCTTTTTTTTCTTTTTGCGATTTTGTGACTTTTATTTTTGGAGAAGGGAATCTT
GGGGAGGGGGGACAAAAGGAAGAACCGCTCACCAGGAAGTACACAAAGGGGATTAGAGAT
CGCCTGCGGGAGTCGGAGCCCTAGGGTCCAGGATGGATGTGGCGGACCCGCAGCAGCTGG
GCATGTTTACAGAGGGCGAGCTGATGTCGGTGGGGATGGACACGTTCATCCATCGCATCG
ACTCCACTGAGGTCATCTACCAGCCCCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTACC
TGATGGGGGACCTGCTGGGGGAGGGGTCGTATGGCAAAGTGAAGGAGGTGCTGGACTCAG
AAACGCTGTGCAGGAGAGCTGTCAAAATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCA
ACGGGGAGGCCAATGTGAAGAAGGAAATCCAACTACTGAGGAGGTTGCGGCACAAAAATG
TCATCCAGCTGGTGGATGTGCTGTACAATGAGGAGAAGCAGAAGATGTATATGGTGATGG
AGTACTGCGTGTGTGGCATGCAGGAGATGCTGGATAGTGTGCCAGAGAAGCGCTTCCCCG
TGTGTCAGGCCCACGGGTACTTCTGCCAGCTGGTGGATGGGCTGGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCAAAACTTGGGACGCTGCACACACCCGGGTGTCCGGGCTTTGGACCAGGCGCGCCTTT
TGAACTCACGTTCAGTACAATCGTTTCTTTTCCAAGAAGGGTTTTCTTTTTCTTTCTTTC
TTTCTTTCTTTTTTTTCTTTTTGCGATTTTGTGACTTTTATTTTTGGAGAAGGGAATCTT
GGGGAGGGGGGACAAAAGGAAGAACCGCTCACCAGGAAGTACACAAAGGGGATTAGAGAT
CGCCTGCGGGAGTCGGAGCCCTAGGGTCCAGGATGGATGTGGCGGACCCGCAGCAGCTGG
GCATGTTTACAGAGGGCGAGCTGATGTCGGTGGGGATGGACACGTTCATCCATCGCATCG
ACTCCACTGAGGTCATCTACCAGCCCCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTACC
TGATGGGGGACCTGCTGGGGGAGGGGTCGTATGGCAAAGTGAAGGAGGTGCTGGACTCAG
AAACGCTGTGCAGGAGAGCTGTCAAAATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCA
ACGGGGAGGCCAATGTGAAGAAGGAAATCCAACTACTGAGGAGGTTGCGGCACAAAAATG
TCATCCAGCTGGTGGATGTGCTGTACAATGAGGAGAAGCAGAAGATGTATATGGTGATGG
AGTACTGCGTGTGTGGCATGCAGGAGATGCTGGATAGTGTGCCAGAGAAGCGCTTCCCCG
TGTGTCAGGCCCACGGGTACTTCTGCCAGCTGGTGGATGGGCTGGAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|50761075|ref|XP_418226.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50761075|ref|XP_418226.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-570, gnl|bosTau2|chr7 (29232802-29232228)
               

               
               5-570, gnl|Hg17|chr19 (1157651-1158210)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-570, gnl|bosTau2|chr7 (29232802-29232228)
               

               
               5-570, gnl|Hg17|chr19 (1157651-1158210)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cty (0.20816)
               

               
               pla (0.133672)
               

               
               ese (0.126502)
               

               
               clu (0.119646)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)
               

               
               pla (0.133672)
               

               
               ese (0.126502)
               

               
               clu (0.119646)

	5-570, gnl\|bosTau2\|chr7 (29232802-29232228)
	5-570, gnl\|Hg17\|chr19 (1157651-1158210)