Non-Coding RNA Search

Ss1.1-Mixn-0013n13.5.5

Sequence:


               
               GCTTGAACAAAGAGTTTAAAGACTTGAAGGTTATAGTGTTAATGTCGTGTGCAAACTCAA
GACCATATATAAGACTATGGATTACCCATAATTGGTTCTGTATACTTCCTTGTGTGATTA
AATCACATTGGTGAATACCATGCACTTCTGTTCTTTGTGACCCCAGCAAAAGGATGATAG
TGATGATGTGTTTAATATCAACACCTACTGATACATACCAGCAGGAGTACCATTGTGGTA
TAGGAGGTGAATGGAACCCATACATCAGAACAGAGATGGAATTGGAAGCATAAAAGATTA
AAATTAAAGACAAGAAAAGGGAGATTTTAAGAATATTGATAAAGCAGATTTTGATAGTTT
TGAAGAAACAAAGGGACCTCTTCCCCGCTTTGAATTATATGGTGCCATGTTGTCTTAGAT
TTGGTCTAGCTGTTGTCTGAGAATGCCAGACAGTGATTTAGTGGCTTTTCTTCTGATCTC
CATCACAGTGAAGAAGTTGAAAGAATGCCTGCAGGGAGACAGGAATAAATAGGTTTTTTT
GGGGTCTAGGTGGTGGGGATGTCAAAACTATCATCGCCTGCTTTCAACAGCCCTAGTATG
TTGTTTTCATGTCAGTGACAAGTATTCTGGAATGCATTTCATTTGTGCAAAGATGTTCCT
CAACTTTGTCTACCAGGAATGAAAGTTTAACTTTGACCCTTCCTAAAGGGAGTTATTTGT
AAGATGGGATTGACCTCTCTTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTGAACAAAGAGTTTAAAGACTTGAAGGTTATAGTGTTAATGTCGTGTGCAAACTCAA
GACCATATATAAGACTATGGATTACCCATAATTGGTTCTGTATACTTCCTTGTGTGATTA
AATCACATTGGTGAATACCATGCACTTCTGTTCTTTGTGACCCCAGCAAAAGGATGATAG
TGATGATGTGTTTAATATCAACACCTACTGATACATACCAGCAGGAGTACCATTGTGGTA
TAGGAGGTGAATGGAACCCATACATCAGAACAGAGATGGAATTGGAAGCATAAAAGATTA
AAATTAAAGACAAGAAAAGGGAGATTTTAAGAATATTGATAAAGCAGATTTTGATAGTTT
TGAAGAAACAAAGGGACCTCTTCCCCGCTTTGAATTATATGGTGCCATGTTGTCTTAGAT
TTGGTCTAGCTGTTGTCTGAGAATGCCAGACAGTGATTTAGTGGCTTTTCTTCTGATCTC
CATCACAGTGAAGAAGTTGAAAGAATGCCTGCAGGGAGACAGGAATAAATAGGTTTTTTT
GGGGTCTAGGTGGTGGGGATGTCAAAACTATCATCGCCTGCTTTCAACAGCCCTAGTATG
TTGTTTTCATGTCAGTGACAAGTATTCTGGAATGCATTTCATTTGTGCAAAGATGTTCCT
CAACTTTGTCTACCAGGAATGAAAGTTTAACTTTGACCCTTCCTAAAGGGAGTTATTTGT
AAGATGGGATTGACCTCTCTTACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-718, gnl|bosTau2|chr8 (14855820-14856566)
               

               
               3-718, gnl|Hg17|chr9 (13093851-13092765)
               

               
               3-718, gnl|Mm7|chr4 (80680823-80680143)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-718, gnl|bosTau2|chr8 (14855820-14856566)
               

               
               3-718, gnl|Hg17|chr9 (13093851-13092765)
               

               
               3-718, gnl|Mm7|chr4 (80680823-80680143)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               nmm (0.132802)

	3-718, gnl\|bosTau2\|chr8 (14855820-14856566)
	3-718, gnl\|Hg17\|chr9 (13093851-13092765)
	3-718, gnl\|Mm7\|chr4 (80680823-80680143)