Ss1.1-Mixn-0013n24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGAATAGTATCAAACCTGACCTGATCCAGCTGCGCAAGATCCGAGATCAGCACCTTGTGT GGCTCAATCACAAAGGAGTGAGACAGAAACGCCTGAATGCCTGGCTGGGAATCAAGAATG AGGATGCTGATGAGACCTATTTTGTCAATGAGGAAGATGAAAATCTGCCCCATTATGATG AGAAAACCTGGTTCGTTGAGGATGTCAATCGAGTACAAGCAGAGGATCTGCTTTATGGGA AGCCCGATGGCGCCTTCTTAATTCGGGAGAGTAGCAAGAAAGGATGCTACGCTTGCTCTG TGGTCGCCGACGGGGAGGTGAAGCACTGCGTGATCTACAGCACGGCTCGCGGCTACGGCT TTGCAGAGCCCTACAATCTGTACAGCTCGCTGAAGGAGCTGGTGCTCCATTACCAGCAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGAATAGTATCAAACCTGACCTGATCCAGCTGCGCAAGATCCGAGATCAGCACCTTGTGT GGCTCAATCACAAAGGAGTGAGACAGAAACGCCTGAATGCCTGGCTGGGAATCAAGAATG AGGATGCTGATGAGACCTATTTTGTCAATGAGGAAGATGAAAATCTGCCCCATTATGATG AGAAAACCTGGTTCGTTGAGGATGTCAATCGAGTACAAGCAGAGGATCTGCTTTATGGGA AGCCCGATGGCGCCTTCTTAATTCGGGAGAGTAGCAAGAAAGGATGCTACGCTTGCTCTG TGGTCGCCGACGGGGAGGTGAAGCACTGCGTGATCTACAGCACGGCTCGCGGCTACGGCT TTGCAGAGCCCTACAATCTGTACAGCTCGCTGAAGGAGCTGGTGCTCCATTACCAGCAGA |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 134-304, gnl|bosTau2|chr3 (70194098-70194268) | |
| 134-304, gnl|canFam2|chr15 (17350667-17350487) | |
| 134-304, gnl|danRer3|chrUn (37850331-37850506) | |
| 134-304, gnl|dasNov1|scaffold_12395 (45163-45325) | |
| 134-304, gnl|echTel1|scaffold_2908 (4183-4003) | |
| 134-304, gnl|fr1|chrUn (58538223-58538043) | |
| 134-304, gnl|galGal2|chr8 (21681286-21681466) | |
| 134-304, gnl|hg17|chr1 (46223603-46223783) | |
| 134-304, gnl|Hg17|chr1 (46223780-46223610) | |
| 134-304, gnl|loxAfr1|scaffold_41343 (4476-4656) | |
| 134-304, gnl|mm7|chr4 (115668715-115668535) | |
| 134-304, gnl|Mm7|chr4 (115668536-115668706) | |
| 134-304, gnl|monDom2|scaffold_70 (7015694-7015514) | |
| 134-304, gnl|oryCun1|scaffold_182629 (15276-15096) | |
| 134-304, gnl|panTro1|chr1_random (67369206-67369026) | |
| 134-304, gnl|rheMac2|chr1 (48977949-48978129) | |
| 134-304, gnl|rn3|chr5 (136564607-136564427) | |
| 134-304, gnl|tetNig1|chrUn_random (98456944-98456797) | |
| 134-304, gnl|xenTro1|scaffold_14 (3488538-3488358) | |
| 305-420, gnl|bosTau2|chr3 (70201377-70201492) | |
| 305-420, gnl|canFam2|chr15 (17359240-17359035) | |
| 305-420, gnl|danRer3|chrUn (37848570-37848778) | |
| 305-420, gnl|dasNov1|scaffold_121816 (1161-956) | |
| 305-420, gnl|echTel1|scaffold_294892 (8819-8614) | |
| 305-420, gnl|fr1|chrUn (58538505-58538325) | |
| 305-420, gnl|galGal2|chr8 (21679662-21679870) | |
| 305-420, gnl|hg17|chr1 (46221365-46221570) | |
| 305-420, gnl|Hg17|chr1 (46221563-46221448) | |
| 305-420, gnl|loxAfr1|scaffold_79474 (4514-4719) | |
| 305-420, gnl|mm7|chr4 (115676273-115676070) | |
| 305-420, gnl|Mm7|chr4 (115676073-115676188) | |
| 305-420, gnl|monDom2|scaffold_70 (7016228-7016023) | |
| 305-420, gnl|oryCun1|scaffold_182629 (22530-22325) | |
| 305-420, gnl|panTro1|chr1_random (67371450-67371245) | |
| 305-420, gnl|rheMac2|chr1 (48975746-48975951) | |
| 305-420, gnl|rn3|chr5 (136571701-136571498) | |
| 305-420, gnl|tetNig1|chrUn_random (98457224-98457039) | |
| 305-420, gnl|xenTro1|scaffold_14 (3489115-3488910) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 134-304, gnl|bosTau2|chr3 (70194098-70194268) | |
| 134-304, gnl|canFam2|chr15 (17350667-17350487) | |
| 134-304, gnl|danRer3|chrUn (37850331-37850506) | |
| 134-304, gnl|dasNov1|scaffold_12395 (45163-45325) | |
| 134-304, gnl|echTel1|scaffold_2908 (4183-4003) | |
| 134-304, gnl|fr1|chrUn (58538223-58538043) | |
| 134-304, gnl|galGal2|chr8 (21681286-21681466) | |
| 134-304, gnl|hg17|chr1 (46223603-46223783) | |
| 134-304, gnl|Hg17|chr1 (46223780-46223610) | |
| 134-304, gnl|loxAfr1|scaffold_41343 (4476-4656) | |
| 134-304, gnl|mm7|chr4 (115668715-115668535) | |
| 134-304, gnl|Mm7|chr4 (115668536-115668706) | |
| 134-304, gnl|monDom2|scaffold_70 (7015694-7015514) | |
| 134-304, gnl|oryCun1|scaffold_182629 (15276-15096) | |
| 134-304, gnl|panTro1|chr1_random (67369206-67369026) | |
| 134-304, gnl|rheMac2|chr1 (48977949-48978129) | |
| 134-304, gnl|rn3|chr5 (136564607-136564427) | |
| 134-304, gnl|tetNig1|chrUn_random (98456944-98456797) | |
| 134-304, gnl|xenTro1|scaffold_14 (3488538-3488358) | |
| 305-420, gnl|bosTau2|chr3 (70201377-70201492) | |
| 305-420, gnl|canFam2|chr15 (17359240-17359035) | |
| 305-420, gnl|danRer3|chrUn (37848570-37848778) | |
| 305-420, gnl|dasNov1|scaffold_121816 (1161-956) | |
| 305-420, gnl|echTel1|scaffold_294892 (8819-8614) | |
| 305-420, gnl|fr1|chrUn (58538505-58538325) | |
| 305-420, gnl|galGal2|chr8 (21679662-21679870) | |
| 305-420, gnl|hg17|chr1 (46221365-46221570) | |
| 305-420, gnl|Hg17|chr1 (46221563-46221448) | |
| 305-420, gnl|loxAfr1|scaffold_79474 (4514-4719) | |
| 305-420, gnl|mm7|chr4 (115676273-115676070) | |
| 305-420, gnl|Mm7|chr4 (115676073-115676188) | |
| 305-420, gnl|monDom2|scaffold_70 (7016228-7016023) | |
| 305-420, gnl|oryCun1|scaffold_182629 (22530-22325) | |
| 305-420, gnl|panTro1|chr1_random (67371450-67371245) | |
| 305-420, gnl|rheMac2|chr1 (48975746-48975951) | |
| 305-420, gnl|rn3|chr5 (136571701-136571498) | |
| 305-420, gnl|tetNig1|chrUn_random (98457224-98457039) | |
| 305-420, gnl|xenTro1|scaffold_14 (3489115-3488910) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |