Ss1.1-Mixn-0014e10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCTATGTATTTCGTGCCGATGCAGTGTTTTTACCTGCGGAACTTGGCATCTTGGATCTG AGGCGTCTTCTCTCCGGGTTTCTTGGGGGCAGTTCCGAGGCTGCTGCAACCAAGGCTGTG GCCTAGTGCCTGTTGGGGCGCGCCCCCGTTTGCTCGGCCATGCCCGCGGCCGCCGCCCCC ATAATCAGCTTGGTCCAAAAGCTGGTTCTGTACGAGACTAGAGCTAGATACTTTCTAGTT GGGAGCAATCATGCAGAAACAAAATACCGTGTTTTGAAAATTGATAGAACAGAACCAAAA GATTTGGTCATAATTGATGATAGGCATGTCTATACGCAACAAGAAGTGCGAGAACTTCTT GGCCGCTTGGATCTAGGAAATAGGACAAAGATGGGACAGAAAGGATCCTCTGGGTTATTT CGAGCTGTTTCAGCTTTTGGTGTTGTAGGTTTTGTTAGATTTTTAGAAGGCTATTATATT GTGTTAATAACCAAAAGGAGGAAGATGGCAGATATTGGAGGCCATGCAATATATAAGATT GAAGATACAAATATGATCTATATACCCAATGATTCTGTACGGATTACTCATCCTGATGAA GCTAGGTATCTACGAATATTTCAAAACGTGGACCTCTCTAGCAATTTTTACTTCAGTTAC AGCTATGATTTGTCCCACTCACTTCAGTATAATCTCACTGTCTTGCGAATGCCCCTGGAG ATGTTAAAGTCAGAAACGACCCAGACCCGCCAGGAGAGTTTCGACATTTTTGAAGATGAA GGATTAATTACACAGGGTAGAAGCGGCGTATTTGGGATCTGTAGCGAGCCTTATATGAAG TATGTGTGGAACGGCGAACTTCTGGATATAATTAAAAACACCGTGCACCGTGACTGGCTG TTGTATATTATTCATGGGTTCTGTGGGCAGTCAAAGCTCTTGATCTATGGACGACCCGTG TATGTCACTTTAATAGCTAGAAGATCCAGTAAGTTTGCTGGGACCCGTTTTCTCAAGAGA GGTGCAAACTGTGAGGGTGATGTTGCAAATGAAGTGGAAACTGAACAAATACTCTGCGAT GCTTCTGTCATGTCTTTTACTGCAGGAAGTTACTCTTCTTACGTACAAGTTAGAGGATCA GTTCCCTTATACTGGTCTCAGGACATTTCAACTATGATGCCTAAGCCACCTATTACACTG GATCAGGCAGATCCATTTGCCCACGTGGCTGCCCTTCACTTTGACCAGATGCTTCAGAGG TTTGGCTCCCCCATCATCATCTTGAATTTAGTGAAGGAACGAGAGAAAAGAAAGCACGAG AGAATCCTGAGTGAAGAACTCGTAGCTGCTGTGACCTACCTCAACCAGTTTTTGCCTCCT GAGCACACGATTATTTATATTCCTTGGGATATGGCCAAGTACACCAAAAGCAAGCTGTGT AATGTTCTGGATCGCCTGAACGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCTATGTATTTCGTGCCGATGCAGTGTTTTTACCTGCGGAACTTGGCATCTTGGATCTG AGGCGTCTTCTCTCCGGGTTTCTTGGGGGCAGTTCCGAGGCTGCTGCAACCAAGGCTGTG GCCTAGTGCCTGTTGGGGCGCGCCCCCGTTTGCTCGGCCATGCCCGCGGCCGCCGCCCCC ATAATCAGCTTGGTCCAAAAGCTGGTTCTGTACGAGACTAGAGCTAGATACTTTCTAGTT GGGAGCAATCATGCAGAAACAAAATACCGTGTTTTGAAAATTGATAGAACAGAACCAAAA GATTTGGTCATAATTGATGATAGGCATGTCTATACGCAACAAGAAGTGCGAGAACTTCTT GGCCGCTTGGATCTAGGAAATAGGACAAAGATGGGACAGAAAGGATCCTCTGGGTTATTT CGAGCTGTTTCAGCTTTTGGTGTTGTAGGTTTTGTTAGATTTTTAGAAGGCTATTATATT GTGTTAATAACCAAAAGGAGGAAGATGGCAGATATTGGAGGCCATGCAATATATAAGATT GAAGATACAAATATGATCTATATACCCAATGATTCTGTACGGATTACTCATCCTGATGAA GCTAGGTATCTACGAATATTTCAAAACGTGGACCTCTCTAGCAATTTTTACTTCAGTTAC AGCTATGATTTGTCCCACTCACTTCAGTATAATCTCACTGTCTTGCGAATGCCCCTGGAG ATGTTAAAGTCAGAAACGACCCAGACCCGCCAGGAGAGTTTCGACATTTTTGAAGATGAA GGATTAATTACACAGGGTAGAAGCGGCGTATTTGGGATCTGTAGCGAGCCTTATATGAAG TATGTGTGGAACGGCGAACTTCTGGATATAATTAAAAACACCGTGCACCGTGACTGGCTG TTGTATATTATTCATGGGTTCTGTGGGCAGTCAAAGCTCTTGATCTATGGACGACCCGTG TATGTCACTTTAATAGCTAGAAGATCCAGTAAGTTTGCTGGGACCCGTTTTCTCAAGAGA GGTGCAAACTGTGAGGGTGATGTTGCAAATGAAGTGGAAACTGAACAAATACTCTGCGAT GCTTCTGTCATGTCTTTTACTGCAGGAAGTTACTCTTCTTACGTACAAGTTAGAGGATCA GTTCCCTTATACTGGTCTCAGGACATTTCAACTATGATGCCTAAGCCACCTATTACACTG GATCAGGCAGATCCATTTGCCCACGTGGCTGCCCTTCACTTTGACCAGATGCTTCAGAGG TTTGGCTCCCCCATCATCATCTTGAATTTAGTGAAGGAACGAGAGAAAAGAAAGCACGAG AGAATCCTGAGTGAAGAACTCGTAGCTGCTGTGACCTACCTCAACCAGTTTTTGCCTCCT GAGCACACGATTATTTATATTCCTTGGGATATGGCCAAGTACACCAAAAGCAAGCTGTGT AATGTTCTGGATCGCCTGAACGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 88 entry(ies) | More info |
| Aligned organism(s): 88 entry(ies) | Help | Less info |
| 226-345, gnl|bosTau2|chr9 (23283650-23283770) | |
| 226-345, gnl|canFam2|chr12 (69562535-69562653) | |
| 226-345, gnl|danRer3|chr23 (21189962-21189844) | |
| 226-345, gnl|dasNov1|scaffold_24914 (6856-6974) | |
| 226-345, gnl|echTel1|scaffold_312708 (51021-51139) | |
| 226-345, gnl|fr1|chrUn (22964483-22964590) | |
| 226-345, gnl|galGal2|chr3 (65247905-65247788) | |
| 226-345, gnl|hg17|chr6 (110142962-110143080) | |
| 226-345, gnl|Hg17|chr6 (110142974-110143094) | |
| 226-345, gnl|loxAfr1|scaffold_22148 (15457-15577) | |
| 226-345, gnl|mm7|chr10 (41101758-41101640) | |
| 226-345, gnl|Mm7|chr10 (41101744-41101637) | |
| 226-345, gnl|oryCun1|scaffold_183841 (7022-7140) | |
| 226-345, gnl|panTro1|chr5 (112456573-112456691) | |
| 226-345, gnl|rheMac2|chr4 (154216171-154216053) | |
| 226-345, gnl|rn3|chr20 (45250605-45250487) | |
| 226-345, gnl|xenTro1|scaffold_773 (554066-554184) | |
| 425-613, gnl|bosTau2|chr9 (23292493-23292682) | |
| 425-613, gnl|canFam2|chr12 (69571671-69571877) | |
| 425-613, gnl|danRer3|chr23 (21179520-21179330) | |
| 425-613, gnl|echTel1|scaffold_256228 (360-553) | |
| 425-613, gnl|fr1|chrUn (22966879-22967056) | |
| 425-613, gnl|galGal2|chr3 (65244307-65244099) | |
| 425-613, gnl|hg17|chr6 (110154977-110155184) | |
| 425-613, gnl|Hg17|chr6 (110154989-110155168) | |
| 425-613, gnl|loxAfr1|scaffold_109442 (7953-7748) | |
| 425-613, gnl|mm7|chr10 (41093587-41093381) | |
| 425-613, gnl|Mm7|chr10 (41093570-41093395) | |
| 425-613, gnl|monDom2|scaffold_0 (110510201-110509995) | |
| 425-613, gnl|oryCun1|scaffold_162815 (4487-4283) | |
| 425-613, gnl|panTro1|chr5 (112468514-112468722) | |
| 425-613, gnl|rheMac2|chr4 (154203964-154203756) | |
| 425-613, gnl|rn3|chr20 (45239203-45239007) | |
| 425-613, gnl|tetNig1|chr14 (2690985-2691159) | |
| 425-613, gnl|xenTro1|scaffold_773 (582621-582801) | |
| 653-806, gnl|bosTau2|chr9 (23299872-23300025) | |
| 653-806, gnl|canFam2|chr12 (69583403-69583588) | |
| 653-806, gnl|danRer3|chr23 (21173599-21173448) | |
| 653-806, gnl|dasNov1|scaffold_59720 (6806-6621) | |
| 653-806, gnl|echTel1|scaffold_271322 (2635-2820) | |
| 653-806, gnl|fr1|chrUn (22967516-22967707) | |
| 653-806, gnl|galGal2|chr3 (65240885-65240701) | |
| 653-806, gnl|hg17|chr6 (110163004-110163189) | |
| 653-806, gnl|Hg17|chr6 (110163042-110163195) | |
| 653-806, gnl|mm7|chr10 (41086533-41086351) | |
| 653-806, gnl|Mm7|chr10 (41086496-41086343) | |
| 653-806, gnl|monDom2|scaffold_0 (110502723-110502539) | |
| 653-806, gnl|oryCun1|scaffold_155713 (17850-17668) | |
| 653-806, gnl|panTro1|chr5 (112476541-112476726) | |
| 653-806, gnl|rheMac2|chr4 (154195980-154195795) | |
| 653-806, gnl|rn3|chr20 (45228887-45228705) | |
| 653-806, gnl|tetNig1|chr14 (2691880-2692061) | |
| 653-806, gnl|xenTro1|scaffold_773 (584546-584729) | |
| 1034-1196, gnl|bosTau2|chr9 (23309217-23309379) | |
| 1034-1196, gnl|canFam2|chr12 (69590743-69590941) | |
| 1034-1196, gnl|danRer3|chr23 (21158510-21158345) | |
| 1034-1196, gnl|dasNov1|scaffold_59720 (246-48) | |
| 1034-1196, gnl|fr1|chrUn (22969900-22970087) | |
| 1034-1196, gnl|galGal2|chr3 (65236750-65236546) | |
| 1034-1196, gnl|hg17|chr6 (110170980-110171178) | |
| 1034-1196, gnl|Hg17|chr6 (110171004-110171166) | |
| 1034-1196, gnl|mm7|chr10 (41080120-41079922) | |
| 1034-1196, gnl|Mm7|chr10 (41080094-41079932) | |
| 1034-1196, gnl|monDom2|scaffold_0 (110491244-110491048) | |
| 1034-1196, gnl|oryCun1|scaffold_155713 (11144-10946) | |
| 1034-1196, gnl|panTro1|chr5 (112484742-112484940) | |
| 1034-1196, gnl|rheMac2|chr4 (154187964-154187766) | |
| 1034-1196, gnl|rn3|chr20 (45222806-45222608) | |
| 1034-1196, gnl|tetNig1|chr14 (2693983-2694165) | |
| 1034-1196, gnl|xenTro1|scaffold_773 (593043-593238) | |
| 1287-1430, gnl|bosTau2|chr9 (23318584-23318727) | |
| 1287-1430, gnl|canFam2|chr12 (69595686-69595852) | |
| 1287-1430, gnl|danRer3|chr13 (46550017-46550185) | |
| 1287-1430, gnl|echTel1|scaffold_291495 (39915-40081) | |
| 1287-1430, gnl|fr1|chrUn (22975272-22975434) | |
| 1287-1430, gnl|galGal2|chr3 (65232899-65232744) | |
| 1287-1430, gnl|hg17|chr6 (110188128-110188293) | |
| 1287-1430, gnl|Hg17|chr6 (110188136-110188279) | |
| 1287-1430, gnl|loxAfr1|scaffold_22148 (52770-52914) | |
| 1287-1430, gnl|mm7|chr10 (41074217-41074052) | |
| 1287-1430, gnl|Mm7|chr10 (41074203-41074060) | |
| 1287-1430, gnl|monDom2|scaffold_0 (110484745-110484573) | |
| 1287-1430, gnl|oryCun1|scaffold_155713 (8029-7864) | |
| 1287-1430, gnl|panTro1|chr5 (112502602-112502767) | |
| 1287-1430, gnl|rheMac2|chr4 (154175964-154175799) | |
| 1287-1430, gnl|rn3|chr20 (45217043-45216877) | |
| 1287-1430, gnl|tetNig1|chr14 (2696688-2696834) | |
| 1287-1430, gnl|xenTro1|scaffold_174 (31253-31415) |
| Aligned organism(s): 88 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 226-345, gnl|bosTau2|chr9 (23283650-23283770) | |
| 226-345, gnl|canFam2|chr12 (69562535-69562653) | |
| 226-345, gnl|danRer3|chr23 (21189962-21189844) | |
| 226-345, gnl|dasNov1|scaffold_24914 (6856-6974) | |
| 226-345, gnl|echTel1|scaffold_312708 (51021-51139) | |
| 226-345, gnl|fr1|chrUn (22964483-22964590) | |
| 226-345, gnl|galGal2|chr3 (65247905-65247788) | |
| 226-345, gnl|hg17|chr6 (110142962-110143080) | |
| 226-345, gnl|Hg17|chr6 (110142974-110143094) | |
| 226-345, gnl|loxAfr1|scaffold_22148 (15457-15577) | |
| 226-345, gnl|mm7|chr10 (41101758-41101640) | |
| 226-345, gnl|Mm7|chr10 (41101744-41101637) | |
| 226-345, gnl|oryCun1|scaffold_183841 (7022-7140) | |
| 226-345, gnl|panTro1|chr5 (112456573-112456691) | |
| 226-345, gnl|rheMac2|chr4 (154216171-154216053) | |
| 226-345, gnl|rn3|chr20 (45250605-45250487) | |
| 226-345, gnl|xenTro1|scaffold_773 (554066-554184) | |
| 425-613, gnl|bosTau2|chr9 (23292493-23292682) | |
| 425-613, gnl|canFam2|chr12 (69571671-69571877) | |
| 425-613, gnl|danRer3|chr23 (21179520-21179330) | |
| 425-613, gnl|echTel1|scaffold_256228 (360-553) | |
| 425-613, gnl|fr1|chrUn (22966879-22967056) | |
| 425-613, gnl|galGal2|chr3 (65244307-65244099) | |
| 425-613, gnl|hg17|chr6 (110154977-110155184) | |
| 425-613, gnl|Hg17|chr6 (110154989-110155168) | |
| 425-613, gnl|loxAfr1|scaffold_109442 (7953-7748) | |
| 425-613, gnl|mm7|chr10 (41093587-41093381) | |
| 425-613, gnl|Mm7|chr10 (41093570-41093395) | |
| 425-613, gnl|monDom2|scaffold_0 (110510201-110509995) | |
| 425-613, gnl|oryCun1|scaffold_162815 (4487-4283) | |
| 425-613, gnl|panTro1|chr5 (112468514-112468722) | |
| 425-613, gnl|rheMac2|chr4 (154203964-154203756) | |
| 425-613, gnl|rn3|chr20 (45239203-45239007) | |
| 425-613, gnl|tetNig1|chr14 (2690985-2691159) | |
| 425-613, gnl|xenTro1|scaffold_773 (582621-582801) | |
| 653-806, gnl|bosTau2|chr9 (23299872-23300025) | |
| 653-806, gnl|canFam2|chr12 (69583403-69583588) | |
| 653-806, gnl|danRer3|chr23 (21173599-21173448) | |
| 653-806, gnl|dasNov1|scaffold_59720 (6806-6621) | |
| 653-806, gnl|echTel1|scaffold_271322 (2635-2820) | |
| 653-806, gnl|fr1|chrUn (22967516-22967707) | |
| 653-806, gnl|galGal2|chr3 (65240885-65240701) | |
| 653-806, gnl|hg17|chr6 (110163004-110163189) | |
| 653-806, gnl|Hg17|chr6 (110163042-110163195) | |
| 653-806, gnl|mm7|chr10 (41086533-41086351) | |
| 653-806, gnl|Mm7|chr10 (41086496-41086343) | |
| 653-806, gnl|monDom2|scaffold_0 (110502723-110502539) | |
| 653-806, gnl|oryCun1|scaffold_155713 (17850-17668) | |
| 653-806, gnl|panTro1|chr5 (112476541-112476726) | |
| 653-806, gnl|rheMac2|chr4 (154195980-154195795) | |
| 653-806, gnl|rn3|chr20 (45228887-45228705) | |
| 653-806, gnl|tetNig1|chr14 (2691880-2692061) | |
| 653-806, gnl|xenTro1|scaffold_773 (584546-584729) | |
| 1034-1196, gnl|bosTau2|chr9 (23309217-23309379) | |
| 1034-1196, gnl|canFam2|chr12 (69590743-69590941) | |
| 1034-1196, gnl|danRer3|chr23 (21158510-21158345) | |
| 1034-1196, gnl|dasNov1|scaffold_59720 (246-48) | |
| 1034-1196, gnl|fr1|chrUn (22969900-22970087) | |
| 1034-1196, gnl|galGal2|chr3 (65236750-65236546) | |
| 1034-1196, gnl|hg17|chr6 (110170980-110171178) | |
| 1034-1196, gnl|Hg17|chr6 (110171004-110171166) | |
| 1034-1196, gnl|mm7|chr10 (41080120-41079922) | |
| 1034-1196, gnl|Mm7|chr10 (41080094-41079932) | |
| 1034-1196, gnl|monDom2|scaffold_0 (110491244-110491048) | |
| 1034-1196, gnl|oryCun1|scaffold_155713 (11144-10946) | |
| 1034-1196, gnl|panTro1|chr5 (112484742-112484940) | |
| 1034-1196, gnl|rheMac2|chr4 (154187964-154187766) | |
| 1034-1196, gnl|rn3|chr20 (45222806-45222608) | |
| 1034-1196, gnl|tetNig1|chr14 (2693983-2694165) | |
| 1034-1196, gnl|xenTro1|scaffold_773 (593043-593238) | |
| 1287-1430, gnl|bosTau2|chr9 (23318584-23318727) | |
| 1287-1430, gnl|canFam2|chr12 (69595686-69595852) | |
| 1287-1430, gnl|danRer3|chr13 (46550017-46550185) | |
| 1287-1430, gnl|echTel1|scaffold_291495 (39915-40081) | |
| 1287-1430, gnl|fr1|chrUn (22975272-22975434) | |
| 1287-1430, gnl|galGal2|chr3 (65232899-65232744) | |
| 1287-1430, gnl|hg17|chr6 (110188128-110188293) | |
| 1287-1430, gnl|Hg17|chr6 (110188136-110188279) | |
| 1287-1430, gnl|loxAfr1|scaffold_22148 (52770-52914) | |
| 1287-1430, gnl|mm7|chr10 (41074217-41074052) | |
| 1287-1430, gnl|Mm7|chr10 (41074203-41074060) | |
| 1287-1430, gnl|monDom2|scaffold_0 (110484745-110484573) | |
| 1287-1430, gnl|oryCun1|scaffold_155713 (8029-7864) | |
| 1287-1430, gnl|panTro1|chr5 (112502602-112502767) | |
| 1287-1430, gnl|rheMac2|chr4 (154175964-154175799) | |
| 1287-1430, gnl|rn3|chr20 (45217043-45216877) | |
| 1287-1430, gnl|tetNig1|chr14 (2696688-2696834) | |
| 1287-1430, gnl|xenTro1|scaffold_174 (31253-31415) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |